Amy K. Schmid
Associate Professor of Biology
Education
Ph.D., University of Washington 2004
B.S., Marquette University 1997
Schmid, A. K., and N. S. Baliga. “Prokaryotic Systems Biology.” In Systems Biology, edited by M. Al-Rubeai and M. Fussenegger, 5:395–423. Springer, 2006.
Tonner, Peter D., Cynthia L. Darnell, Francesca M. L. Bushell, Peter A. Lund, Amy K. Schmid, and Scott C. Schmidler. “A Bayesian non-parametric mixed-effects model of microbial growth curves.” Plos Computational Biology 16, no. 10 (October 26, 2020): e1008366. https://doi.org/10.1371/journal.pcbi.1008366. Full Text
Darnell, Cynthia L., Jenny Zheng, Sean Wilson, Ryan M. Bertoli, Alexandre W. Bisson-Filho, Ethan C. Garner, and Amy K. Schmid. “The Ribbon-Helix-Helix Domain Protein CdrS Regulates the Tubulin Homolog ftsZ2 To Control Cell Division in Archaea.” Mbio 11, no. 4 (August 11, 2020). https://doi.org/10.1128/mbio.01007-20. Full Text
Hwang, Sungmin, Nikita E. Chavarria, Rylee K. Hackley, Amy K. Schmid, and Julie A. Maupin-Furlow. “Gene Expression of Haloferax volcanii on Intermediate and Abundant Sources of Fixed Nitrogen.” International Journal of Molecular Sciences 20, no. 19 (September 26, 2019). https://doi.org/10.3390/ijms20194784. Full Text
Hackley, Rylee K., and Amy K. Schmid. “Global Transcriptional Programs in Archaea Share Features with the Eukaryotic Environmental Stress Response.” Journal of Molecular Biology 431, no. 20 (September 2019): 4147–66. https://doi.org/10.1016/j.jmb.2019.07.029. Full Text
Zaretsky, Marianna, Cynthia L. Darnell, Amy K. Schmid, and Jerry Eichler. “N-Glycosylation Is Important for Halobacterium salinarum Archaellin Expression, Archaellum Assembly and Cell Motility.” Frontiers in Microbiology 10 (January 2019): 1367. https://doi.org/10.3389/fmicb.2019.01367. Full Text
Schmid, A. K. “Conserved principles of transcriptional networks controlling metabolic flexibility in archaea.” Emerging Topics in Life Sciences 2, no. 4 (December 1, 2018): 659–69. https://doi.org/10.1042/ETLS20180036. Full Text
Martin, Jonathan H., Katherine Sherwood Rawls, Jou Chin Chan, Sungmin Hwang, Mar Martinez-Pastor, Lana J. McMillan, Laurence Prunetti, Amy K. Schmid, and Julie A. Maupin-Furlow. “GlpR Is a Direct Transcriptional Repressor of Fructose Metabolic Genes in Haloferax volcanii.” Journal of Bacteriology 200, no. 17 (September 2018). https://doi.org/10.1128/jb.00244-18. Full Text
Dulmage, Keely A., Cynthia L. Darnell, Angie Vreugdenhil, and Amy K. Schmid. “Copy number variation is associated with gene expression change in archaea.” Microbial Genomics 4, no. 9 (September 2018). https://doi.org/10.1099/mgen.0.000210. Full Text
Eun, Ye-Jin, Po-Yi Ho, Minjeong Kim, Salvatore LaRussa, Lydia Robert, Lars D. Renner, Amy Schmid, Ethan Garner, and Ariel Amir. “Archaeal cells share common size control with bacteria despite noisier growth and division.” Nature Microbiology 3, no. 2 (February 2018): 148–54. https://doi.org/10.1038/s41564-017-0082-6. Full Text
Bushell, Francesca M. L., Peter D. Tonner, Sara Jabbari, Amy K. Schmid, and Peter A. Lund. “Synergistic Impacts of Organic Acids and pH on Growth of Pseudomonas aeruginosa: A Comparison of Parametric and Bayesian Non-parametric Methods to Model Growth.” Frontiers in Microbiology 9 (January 2018): 3196. https://doi.org/10.3389/fmicb.2018.03196. Full Text
Pages
Eun, Y., M. Kim, S. A. LaRussa, K. Dulmage, A. K. Schmid, and E. C. Garner. “How archaeal cells generate their cell shape.” In Molecular Biology of the Cell, Vol. 26. AMER SOC CELL BIOLOGY, 2015.
Schmid, Amy, Keely A. Dulmage, Cynthia L. Darnell, and A. Vreugdenhil. “Data and scripts from: Copy number variation is associated with gene expression change in archaea,” May 4, 2018. https://doi.org/10.7924/r4pz54w7h. Full Text
Selected Grants
Genetic and Genomics Training Grant awarded by National Institutes of Health (Mentor). 2020 to 2025
Causes and consequences of regulatory network rewiring under extreme environmental selection awarded by National Science Foundation (Principal Investigator). 2019 to 2023
CAREER: Elucidating cell cycle regulatory networks across the tree of life awarded by National Science Foundation (Principal Investigator). 2017 to 2022
Bioinformatics and Computational Biology Training Program awarded by National Institutes of Health (Mentor). 2005 to 2021
Genetics Training Grant awarded by National Institutes of Health (Mentor). 1979 to 2020
Organization and Function of Cellular Structure awarded by National Institutes of Health (Mentor). 1975 to 2020
Collaborative Research: Remodelling Roadblocks to Replication - Regulatory Systems that Integrate DNA Replication, Recombination and Ubiquitin-like Protein Modification awarded by University of Florida (Principal Investigator). 2016 to 2020
Modeling the function and evolution of metabolic networks across hypersaline-adapted archaea awarded by National Science Foundation (Principal Investigator). 2016 to 2020
Understanding gene regulatory networks in hypersaline-adapted archaea: toward synthetic biology for industrial applications awarded by National Science Foundation (Principal Investigator). 2014 to 2018
Understanding Gene Regulatory Network Function During Stress Response Adaptation of an Archaeal Extremophile awarded by National Science Foundation (Principal Investigator). 2011 to 2015