James S. Clark

Professor of Biology

Office: 
A221 LSRC, Durham, NC 27708
Campus Box: 
90328
Phone: 
(919) 613-8036
Fax: 
(919) 660-7425

Lab Site: http://sites.nicholas.duke.edu/clarklab/

Research Interests: 

James S. Clark is H.L. Blomquist Professor of the Nicholas School of the Environment, Professor of Biology, and Professor of Statistics and Decision Science. Clark’s research focuses on how global change affects forests. Current projects explore consequences of climate, CO2, and disturbance. His lab is using long-term experiments and monitoring studies to determine disturbance and climate controls on the dynamics of 20th century forests in combination with extensive modeling to forecast ecosystem change. Clark has authored over 120 refereed scientific articles and published four books, including Models for Ecological Data (Princeton, 2007), Models for Ecological Data in R (Princeton, 2007), Hierarchical Models of the Environment (Oxford, 2006), and Sediment Records of Biomass Burning and Global Change (Springer, 1997). Clark received a B.S. from the North Carolina State University in Entomology (1979), a M.S. from the University of Massachusetts in Forestry and Wildlife (1984), and a Ph.D. from the University of Minnesota in Ecology (1988). Between his M.S. and Ph.D., he studied one year at the University of Göttingen under a Fulbright-DAAD fellowship. At Duke University, Clark teaches Biodiversity Science and Applications and Ecological Models & Data. He has served as Director for the Center on Global Change, and Director of Graduate Studies for the University Program in Ecology. Clark is recipient of ESA's William Skinner Cooper Award (1988), for his research on barrier beach dynamics, and George Mercer Award (1991), for studies of climate change and fire. For excellence in teaching and research, he was one of 15 scientists recognized by President Clinton with the National Science Foundation’s five-yr Presidential Faculty Fellow Award (1994). In 1998 he was named an Aldo Leopold Leadership Fellow, on behalf of the Ecological Society of America. He is the 2004 Distinguished Alumnus from Natural Resources Conservation, University of Massachusetts. In 2005, he was elected to the American Academy of Arts and Sciences. Clark has testified before congress on behalf of the Ecological Society of America and the NSF budget. He served on editorial boards for Ecology and Ecological Monographs (1996 -1999), Annual Reviews of Ecology and Systematics (1998 - 2003), Global Change Biology (1994 - ), Ecosystems (2003 - ), and Trends in Ecology and Evolution (2006-) and on NSF Advisory panels for Ecology (1992 - 1997), Earth System History (1994), and LTER (2000). He chaired ESA's Mercer Award Committee and was Vice President for Science (1999 - 2004). He served on the Science Advisory Board of the National Center for Ecological Analysis and Synthesis.

James S. Clark is Nicholas Professor of the Nicholas School of the Environment  and Professor of Statistical Science. Clark’s research focuses on how global change affects populations, communities, and ecosystems. Current projects explore consequences of climate, CO2, and disturbance on dynamics of forests. His lab is using long-term experiments and monitoring studies to determine disturbance and climate controls on the dynamics of 20th century forests in combination with extensive modeling to forecast ecosystem change. Clark has authored over 150 refereed scientific articles and published four books, including Models for Ecological Data (Princeton, 2007), Models for Ecological Data in R (Princeton, 2007), Hierarchical Models of the Environment (Oxford, 2006), and Sediment Records of Biomass Burning and Global Change (Springer, 1997). Full publication list. Clark received a BS from the North Carolina State University in Entomology (1979), a MS from the University of Massachusetts in Forestry and Wildlife (1984), and a PhD from the University of Minnesota in Ecology (1988). Between his MS and PhD, he studied one year at the University of Göttingen under a Fulbright-DAAD fellowship. At Duke University, Clark teaches Biodiversity Science and Applications and Ecological Models & Data. He has served as Director for the Center on Global Change, and Director of Graduate Studies for the University Program in Ecology. He currently serves on the University Program of Ecology Executive Committee and chairs the Nicholas School of the Environment committees on Life Sciences and Distinguished Professorships. Clark is recipient of ESA’s William Skinner Cooper Award, for his research on barrier beach dynamics, and George Mercer Award, for studies of climate change and fire. For excellence in teaching and research, he was one of 15 scientists recognized by President Clinton with the National Science Foundation s five-yr Presidential Faculty Fellow Award. He was named an Aldo Leopold Leadership Fellow, on behalf of the Ecological Society of America. He is a Distinguished Alumnus from Natural Resources Conservation, University of Massachusetts. In 2005, he was elected to the American Academy of Arts and Sciences. Clark has testified before congress on behalf of the Ecological Society of America and the NSF budget. He served on editorial boards for Ecology and Ecological Monographs (1996 -1999), Annual Reviews of Ecology and Systematics (1998 – 2003), Global Change Biology (1994 – 2002), Ecosystems (2003 – 2007), Trends in Ecology and Evolution (2006-), and the Journal for Agricultural, Biological, and Environmental Statistics (2010 – ) and on NSF Advisory panels for Ecology (1992 – 1997), Earth System History (1994), LTER (2000), and Ecology and Evolution of Infectious Disease (2009). He chaired ESA’s Mercer Award Committee and was Vice President for Science (1999 – 2004). He was a founding member of the Science Advisory Board of the National Center for Ecological Analysis and Synthesis.

Education

  • Ph.D. 1988, University of Minnesota, Twin Cities

  • PhD , University of Minnesota

  • MS , University of Massachusetts

  • BS , North Carolina State University

Papers Published

Why species tell more about traits than traits about species: predictive analysis., 8, 2016
Clark, JS, Ecology. 97 vol. (8); pp. 1979-1993

The impacts of increasing drought on forest dynamics, structure, and biodiversity in the United States., 7, 2016
Clark, JS; Iverson, L; Woodall, CW; Allen, CD; Bell, DM; Bragg, DC; D'Amato, AW; Davis, FW; Hersh, MH; Ibanez, I; Jackson, ST; Matthews, S; Pederson, N; Peters, M; Schwartz, MW; Waring, KM; Zimmermann, NE, Global Change Biology. 22 vol. (7); pp. 2329-2352

Divergent reproductive allocation trade-offs with canopy exposure across tree species in temperate forests, 6, 2016
Berdanier, AB; Clark, JS, Ecosphere. 7 vol. (6); pp. e01313-e01313

Seed predation and climate impacts on reproductive variation in temperate forests of the southeastern USA., 4, 2016
Bell, DM; Clark, JS, Oecologia. 180 vol. (4); pp. 1223-1234

Joint Modeling of Climate Niches for Adult and Juvenile Trees, 3, 2016
Ghosh, S; Zhu, K; Gelfand, AE; Clark, JS, Journal of Agricultural, Biological, and Environmental Statistics. 21 vol. (1); pp. 111-130

Quantifying global soil carbon losses in response to warming., 11, 2016
Crowther, TW; Todd-Brown, KEO; Rowe, CW; Wieder, WR; Carey, JC; Machmuller, MB; Snoek, BL; Fang, S; Zhou, G; Allison, SD; Blair, JM; Bridgham, SD; Burton, AJ; Carrillo, Y; Reich, PB; Clark, JS; Classen, AT; Dijkstra, FA; Elberling, B; Emmett, BA; Estiarte, M; Frey, SD; Guo, J; Harte, J; Jiang, L; Johnson, BR; Kröel-Dulay, G; Larsen, KS; Laudon, H; Lavallee, JM; Luo, Y; Lupascu, M; Ma, LN; Marhan, S; Michelsen, A; Mohan, J; Niu, S; Pendall, E; Peñuelas, J; Pfeifer-Meister, L; Poll, C; Reinsch, S et al., Nature. 540 vol. (7631); pp. 104-108

Effects of Model Formulation on Estimates of Health in Individual Right Whales (Eubalaena glacialis)., 1, 2016
Schick, RS; Kraus, SD; Rolland, RM; Knowlton, AR; Hamilton, PK; Pettis, HM; Thomas, L; Harwood, J; Clark, JS, 875 pp. 977-985

Multiyear drought-induced morbidity preceding tree death in southeastern U.S. forests, 1, 2016
Berdanier, AB; Clark, JS, Ecological Applications. 26 vol. (1); pp. 17-23

Health of North Atlantic right whales Eubalaena glacialis over three decades: from individual health to demographic and population health trends, 1, 2016
Rolland, RM; Schick, RS; Pettis, HM; Knowlton, AR; Hamilton, PK; Clark, JS; Kraus, SD, Marine ecology progress series. 542 pp. 265-282

Prevalence and strength of density-dependent tree recruitment., 9, 2015
Zhu, K; Woodall, CW; Monteiro, JVD; Clark, JS, Ecology. 96 vol. (9); pp. 2319-2327

Stochastic Modeling for Velocity of Climate Change, 9, 2015
Schliep, EM; Gelfand, AE; Clark, JS, Journal of Agricultural, Biological, and Environmental Statistics. 20 vol. (3); pp. 323-342

A state-space modeling approach to estimating canopy conductance and associated uncertainties from sap flux density data., 7, 2015
Bell, DM; Ward, EJ; Oishi, AC; Oren, R; Flikkema, PG; Clark, JS, Tree Physiology. 35 vol. (7); pp. 792-802

Expert elicitation of seasonal abundance of North Atlantic right whales Eubalaena glacialis in the mid-Atlantic, 11, 2015
Oedekoven, C; Fleishman, E; Hamilton, P; Clark, JS; Schick, RS, Endangered species research. 29 vol. (1); pp. 51-58

More than the sum of the parts: forest climate response from joint species distribution models., 7, 2014
Clark, JS; Gelfand, AE; Woodall, CW; Zhu, K, Ecological Applications. 24 vol. (5); pp. 990-999

The seasonal timing of warming that controls onset of the growing season, 4, 2014
Clark, JS; Melillo, J; Mohan, J; Salk, C, Global Change Biology. 20 vol. (4); pp. 1136-1145

The seasonal timing of warming that controls onset of the growing season., 4, 2014
Clark, JS; Melillo, J; Mohan, J; Salk, C, Global Change Biology. 20 vol. (4); pp. 1136-1145

Response of hydrology to climate change in the southern Appalachian Mountains using Bayesian inference, 2, 2014
Wu, W; Clark, JS; Vose, JM, Hydrological Processes. 28 vol. (4); pp. 1616-1626

Tree phenology responses to winter chilling, spring warming, at north and south range limits, 12, 2014
Clark, JS; Salk, C; Melillo, J; Mohan, J, Functional Ecology. 28 vol. (6); pp. 1344-1355

Tree phenology responses to winter chilling, spring warming, at north and south range limits, 1, 2014
Clark, JS; Salk, C; Melillo, J; Mohan, J, Functional Ecology. 28 vol. (6); pp. 1344-1355

Dual impacts of climate change: Forest migration and turnover through life history, 1, 2014
Zhu, K; Woodall, CW; Ghosh, S; Gelfand, AE; Clark, JS, Global Change Biology. 20 vol. (1); pp. 251-264

Dual impacts of climate change: forest migration and turnover through life history., 1, 2014
Zhu, K; Woodall, CW; Ghosh, S; Gelfand, AE; Clark, JS, Global Change Biology. 20 vol. (1); pp. 251-264

Using short-term measures of behaviour to estimate long-term fitness of southern elephant seals, 1, 2014
New, LF; Clark, JS; Costa, DP; Fleishman, E; Hindell, MA; Klanjšček, T; Lusseau, D; Kraus, S; McMahon, CR; Robinson, PW; Schick, RS; Schwarz, LK; Simmons, SE; Thomas, L; Tyack, P; Harwood, J, Marine ecology progress series. 496 pp. 99-108

Competition-interaction landscapes for the joint response of forests to climate change, 1, 2014
Clark, JS; Bell, DM; Kwit, MC; Zhu, K, Global Change Biology. 20 vol. (6); pp. 1979-1991

The seasonal timing of warming that controls onset of the growing season, 0, 2014
Clark, JS; Melillo, J; Mohan, J; Salk, C, Global Change Biology. 20 vol. (4); pp. 1136-1145

The effects of elevated CO2 and nitrogen fertilization on stomatal conductance estimated from 11 years of scaled sap flux measurements at Duke FACE., 2, 2013
Ward, EJ; Oren, R; Bell, DM; Clark, JS; McCarthy, HR; Kim, H-S; Domec, J-C, Tree Physiology. 33 vol. (2); pp. 135-151

Hydraulic time constants for transpiration of loblolly pine at a free-air carbon dioxide enrichment site., 2, 2013
Ward, EJ; Bell, DM; Clark, JS; Oren, R, Tree Physiology. 33 vol. (2); pp. 123-134

Pathogen regulation of plant diversity via effective specialization, 12, 2013
Benítez, MS; Hersh, MH; Vilgalys, R; Clark, JS, Trends in Ecology & Evolution. 28 vol. (12); pp. 705-711

Pathogen regulation of plant diversity via effective specialization., 12, 2013
Benítez, M-S; Hersh, MH; Vilgalys, R; Clark, JS, Trends in Ecology and Evolution. 28 vol. (12); pp. 705-711

Scaling Integral Projection Models for Analyzing Size Demography, 11, 2013
Gelfand, AE; Ghosh, S; Clark, JS, Statistical science : a review journal of the Institute of Mathematical Statistics. 28 vol. (4); pp. 641-658

Estimating resource acquisition and at-sea body condition of a marine predator, 11, 2013
Schick, RS; New, LF; Thomas, L; Costa, DP; Hindell, MA; Mcmahon, CR; Robinson, PW; Simmons, SE; Thums, M; Harwood, J; Clark, JS, Journal of Animal Ecology. 82 vol. (6); pp. 1300-1315

Estimating resource acquisition and at-sea body condition of a marine predator., 11, 2013
Schick, RS; New, LF; Thomas, L; Costa, DP; Hindell, MA; McMahon, CR; Robinson, PW; Simmons, SE; Thums, M; Harwood, J; Clark, JS, Journal of Animal Ecology. 82 vol. (6); pp. 1300-1315

Process modeling for soil moisture using sensor network data, 10, 2013
Ghosh, S; Bell, DM; Clark, JS; Gelfand, AE; Flikkema, PG, Statistical Methodology.

The effects of deer herbivory and forest type on tree recruitment vary with plant growth stage, 0, 2013
Bugalho, MN; Ibáñez, I; Clark, JS, Forest Ecology and Management. 308 pp. 90-100

Dynamic Inverse Prediction and Sensitivity Analysis With High-Dimensional Responses: Application to Climate-Change Vulnerability of Biodiversity, 0, 2013
Clark, JS; Bell, DM; Kwit, M; Powell, A; Zhu, K, Journal of Agricultural, Biological, and Environmental Statistics. pp. 1-29

Using hierarchical bayes to understand movement, health, and survival in the endangered north atlantic right whale., 0, 2013
Schick, RS; Kraus, SD; Rolland, RM; Knowlton, AR; Hamilton, PK; Pettis, HM; Kenney, RD; Clark, JS, PloS one. 8 vol. (6); pp. e64166

Conservation Efforts May Increase Malaria Burden in the Brazilian Amazon, 0, 2013
Valle, D; Clark, J, PloS one. 8 vol. (3);

Modelling the biological significance of behavioural change in coastal bottlenose dolphins in response to disturbance, 0, 2013
New, LF; Harwood, J; Thomas, L; Donovan, C; Clark, JS; Hastie, G; Thompson, PM; Cheney, B; Scott-Hayward, L; Lusseau, D, Functional Ecology. 27 vol. (2); pp. 314-322

Modelling the biological significance of behavioural change in coastal bottlenose dolphins in response to disturbance, 0, 2013
New, LF; Harwood, J; Thomas, L; Donovan, C; Clark, JS; Hastie, G; Thompson, PM; Cheney, B; Scott-Hayward, L; Lusseau, D, Functional Ecology.

see cv, 0, 2013
J.S. Clark,

Improving the Modeling of Disease Data from the Government Surveillance System: A Case Study on Malaria in the Brazilian Amazon, 0, 2013
Valle, D; Clark, J, PLoS computational biology. 9 vol. (11);

Dynamic Inverse Prediction and Sensitivity Analysis With High-Dimensional Responses: Application to Climate-Change Vulnerability of Biodiversity, 0, 2013
Clark, JS; Bell, DM; Kwit, M; Powell, A; Zhu, K, Journal of Agricultural, Biological, and Environmental Statistics. 18 vol. (3); pp. 376-404

The k-ZIG: flexible modeling for zero-inflated counts., 9, 2012
Ghosh, S; Gelfand, AE; Zhu, K; Clark, JS, Biometrics. 68 vol. (3); pp. 878-885

The coherence problem with the Unified Neutral Theory of Biodiversity., 4, 2012
Clark, JS, Trends in Ecology and Evolution. 27 vol. (4); pp. 198-202

Evaluating the impacts of multiple generalist fungal pathogens on temperate tree seedling survival., 3, 2012
Hersh, MH; Vilgalys, R; Clark, JS, Ecology. 93 vol. (3); pp. 511-520

Individual-scale inference to anticipate climate-change vulnerability of biodiversity., 1, 2012
Clark, JS; Bell, DM; Kwit, M; Stine, A; Vierra, B; Zhu, K, Philosophical Transactions B. 367 vol. (1586); pp. 236-246

Intra- and interspecific tree growth across a long altitudinal gradient in the Peruvian Andes, 0, 2012
Rapp, JM; Silman, MR; Clark, JS; Girardin, CAJ; Galiano, D; Tito, R; Doak, DF, Ecology. 93 vol. (9); pp. 2061-2072

Inference for Size Demography From Point Pattern Data Using Integral Projection Models, 0, 2012
Ghosh, S; Gelfand, AE; Clark, JS, Journal of Agricultural, Biological, and Environmental Statistics. 17 vol. (4); pp. 641-677

Rejoinder, 0, 2012
Ghosh, S; Gelfand, AE; Clark, JS, Journal of Agricultural, Biological, and Environmental Statistics. 17 vol. (4); pp. 693-699

Evidence from individual inference for high-dimensional coexistence: long-term experiments on recruitment response., 0, 2012
Clark, JS; Soltoff, BD; Powell, AS; Read, QD, PloS one. 7 vol. (2); pp. e30050

Multidimensional trade-offs in species responses to disturbance: Implications for diversity in a subtropical forest, 0, 2012
Uriarte, M; Clark, JS; Zimmerman, JK; Comita, LS; Forero-Montaña, J; Thompson, J, Ecology. 93 vol. (1); pp. 191-205

Genetic evidence for hybridization in red oaks (Quercus sect. Lobatae, Fagaceae), 0, 2012
Moran, EV; Willis, J; Clark, JS, American journal of botany. 99 vol. (1); pp. 92-100

Between-site differences in the scale of dispersal and gene flow in red oak, 0, 2012
Moran, EV; Clark, JS, PloS one. 7 vol. (5); pp. e36492

Causes and consequences of unequal seedling production in forest trees: A case study in red oaks, 0, 2012
Moran, EV; Clark, JS, Ecology. 93 vol. (5); pp. 1082-1094

The missing link: From island extinction to Neutral Theory (a reply to Halley and Iwasa), 0, 2012
Clark, JS, Trends in Ecology & Evolution. 27 vol. (7); pp. 364-

Application of a Full Hierarchical Bayesian Model in Assessing Streamflow Response to a Climate Change Scenario at the Coweeta Basin, NC, USA, 0, 2012
Wei, W; Clark, JS; Vose, JM, Journal of Resources and Ecology. 3 vol. (2); pp. 118-128

Response of hydrology to climate change in the southern Appalachian Mountains using Bayesian inferences, 0, 2012
Wu, W; Clark, JS; Vose, JM, Hydrological Processes.

Bayesian inference on age-specific survival for censored and truncated data, 2011
Colchero, F; Clark, JS, Journal of Animal Ecology. (2011) 81 vol. (1); pp. 139-149

Failure to migrate: Lack of tree range expansion in response to climate change, 2011
Zhu, K; Woodall, CW; Clark, JS, Global Change Biology. (2011) 18 vol. (3); pp. 1042-1052

Failure to migrate: lack of tree range expansion in response to climate change, 0, 2012
Zhu, K. and Woodall, C.W. and Clark, J.S., Global Change Biology.

The relative influences of host plant genotype and yearly abiotic variability in determining herbivore abundance, 0, 2012
Evans, L.M. and Clark, J.S. and Whipple, A.V. and Whitham, T.G., Oecologia. 168 vol. (2); pp. 483--489

Inferential ecosystem models, from network data to prediction., 7, 2011
Clark, JS; Agarwal, P; Bell, DM; Flikkema, PG; Gelfand, A; Nguyen, X; Ward, E; Yang, J, Ecological Applications. 21 vol. (5); pp. 1523-1536

Inferential ecosystem models, from network data to prediction, 7, 2011
Clark, James S.; Agarwal, Pankaj; Bell, David M.; Flikkema, Paul G.; Gelfand, Alan; Nguyen, Xuanlong; Ward, Eric; Yang, Jun, ECOLOGICAL APPLICATIONS. 21 vol. (5); pp. 1523-1536

Climate change vulnerability of forest biodiversity: climate and competition tracking of demographic rates, 5, 2011
Clark, James S.; Bell, David M.; Hersh, Michelle H.; Nichols, Lauren, GLOBAL CHANGE BIOLOGY. 17 vol. (5); pp. 1834-1849

not complete, please see CV, Spring, 2011
Clark, JS, AAPG Bulletin. (Spring, 2011)

Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data., 3, 2011
Moran, EV; Clark, JS, Molecular Ecology. 20 vol. (6); pp. 1248-1262

Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data, 3, 2011
Moran, Emily V. and Clark, James S., MOLECULAR ECOLOGY. 20 vol. (6); pp. 1248-1262

Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, 2, 2011
Luo, Yiqi; Melillo, Jerry; Niu, Shuli; Beier, Claus; Clark, James S.; Classen, Aimee T.; Davidson, Eric; Dukes, Jeffrey S.; Evans, R. Dave; Field, Christopher B.; Czimczik, Claudia I.; Keller, Michael and Kimball, Bruce A.; Kueppers, Lara M.; Norby, Richard J.; Pelini, Shannon L.; Pendall, Elise; Rastetter, Edward; Six, Johan; Smith, Melinda; Tjoelker, Mark G.; Torn, Margaret S., GLOBAL CHANGE BIOLOGY. 17 vol. (2); pp. 843-854

Individual-scale variation, species-scale differences: inference needed to understand diversity., 12, 2011
Clark, JS; Bell, DM; Hersh, MH; Kwit, MC; Moran, E; Salk, C; Stine, A; Valle, D; Zhu, K, Ecology Letters. 14 vol. (12); pp. 1273-1287

Exploiting temporal coherence in forest dynamics simulation, 0, 2011
Agarwal, PK; Mølhave, T; Yu, H; Clark, JS, Proceedings of the Annual Symposium on Computational Geometry. pp. 77-86

Data assimilation and ecological forecasting in a data-rich era, 0, 2011
Luo, YQ; Ogle, K; Tucker, C; Fei, S; Gao, C; LaDeau, S; Clark, JS; Schimel, D, Ecological Applications. 21 pp. 1429-1442

Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, 0, 2011
Luo, Y; Melillo, J; Niu, S; Beier, C; Clark, JS; Classen, AT; Davidson, E; Dukes, JS; Evans, RD; Field, CB; Czimczik, CI; Keller, M; Kimball, BA; Kueppers, LM; Norby, RJ; Pelini, SL; Pendall, E; Rastetter, E; Six, J; Smith, M; Tjoelker, MG; Torn, MS, Global Change Biology. 17 vol. (2); pp. 843-854

Climate change vulnerability of forest biodiversity: Climate and competition tracking of demographic rates, 0, 2011
Clark, JS; Bell, DM; Hersh, MH; Nichols, L, Global Change Biology. 17 vol. (5); pp. 1834-1849

Ecological forecasting and data assimilation in a data-rich era, 0, 2011
Luo, Y; Ogle, K; Tucker, C; Fei, S; Gao, C; LaDeau, S; Clark, JS; Schimel, DS, Ecological Applications. 21 vol. (5); pp. 1429-1442

Enhanced understanding of infectious diseases by fusing multiple datasets: a case study on malaria in the Western Brazilian Amazon region., 0, 2011
Valle, D; Clark, JS; Zhao, K, PloS one. 6 vol. (11); pp. e27462

see CV for complete list, 0, 2011
J.S. Clark,

Exploiting Temporal Coherence in Forest Dynamics Simulation, 0, 2011
Agarwal, Pankaj K.; Molhave, Thomas; Yu, Hai; Clark, James S., pp. 77-86

Estimating seed and pollen movement in a monoecious plant: a hierarchical Bayesian approach integrating genetic and ecological data, 0, 2011
MORAN, E.V. and CLARK, J.S., Molecular Ecology. 20 vol. (6); pp. 1248--1262

Individual-scale variation, species-scale differences: inference needed to understand diversity, 0, 2011
Clark, J.S. and Bell, D.M. and Hersh, M.H. and Kwit, M.C. and Moran, E. and Salk, C. and Stine, A. and Valle, D. and Zhu, K., Ecology letters.

Climate change vulnerability of forest biodiversity: climate and competition tracking of demographic rates, 0, 2011
Clark, J.S. and Bell, D.M. and Hersh, M.H. and Nichols, L., Global Change Biology. 17 vol. (5); pp. 1834--1849

Ecological forecasting and data assimilation in a data-rich era, 0, 2011
Luo, Y. and Ogle, K. and Tucker, C. and Fei, S. and Gao, C. and LaDeau, S. and Clark, J.S. and Schimel, D.S., Ecological Applications. 21 vol. (5); pp. 1429--1442

Exploiting temporal coherence in forest dynamics simulation, 0, 2011
Agarwal, P.K. and M{\o}lhave, T. and Yu, H. and Clark, J.S., pp. 77--86

Inferential ecosystem models, from network data to prediction, 0, 2011
Clark, J.S. and Agarwal, P. and Bell, D.M. and Flikkema, P.G. and Gelfand, A. and Nguyen, X. and Ward, E. and Yang, J., Ecological Applications. 21 vol. (5); pp. 1523--1536

Bayesian inference on age-specific survival for censored and truncated data, 0, 2011
Colchero, F. and Clark, J.S., Journal of Animal Ecology. 81 vol. (1); pp. 139--149

Enhanced Understanding of Infectious Diseases by Fusing Multiple Datasets: A Case Study on Malaria in the Western Brazilian Amazon Region, 0, 2011
Valle, D. and Clark, J.S. and Zhao, K., PloS one. 6 vol. (11); pp. e27462

Individuals and the variation needed for high species diversity in forest trees., 2, 2010
Clark, JS, Science. 327 vol. (5969); pp. 1129-1132

Individuals and the variation needed for high species diversity, 0, 2010
Clark, JS, Science.

High-dimensional coexistence based on individual variation: A synthesis of evidence, 0, 2010
Clark, JS; Bell, D; Chu, C; Courbaud, B; Dietze, M; Hersh, M; Hillerislambers, J; Ibáñez, I; Ladeau, S; McMahon, S; Metcalf, J; Mohan, J; Moran, E; Pangle, L; Pearson, S; Salk, C; Shen, Z; Valle, D; Wyckoff, P, Ecological Monographs. 80 vol. (4); pp. 569-608

Coordinated approaches to quantify long-term ecosystem dynamics in response to global change, 0, 2010
Luo, Y. and Melillo, J. and Niu, S. and Beier, C. and Clark, J.S. and CLASSEN, A.T. and Davidson, E. and Dukes, J.S. and EVANS, R. and Field, C.B. and others, Global Change Biology. 17 vol. (2); pp. 843--854

Assimilating multi-source uncertainties of a parsimonious conceptual hydrological model using hierarchical Bayesian modeling, 0, 2010
Wu, W. and Clark, J.S. and Vose, J.M., Journal of hydrology. 394 vol. (3); pp. 436--446

High-dimensional coexistence based on individual variation: a synthesis of evidence, 0, 2010
Clark, J.S. and Bell, D. and Chu, C. and Courbaud, B. and Dietze, M. and Hersh, M. and HilleRisLambers, J. and Ib{\'a}{\~n}ez, I. and LaDeau, S. and McMahon, S. and others, Ecological Monographs. 80 vol. (4); pp. 569--608

Individual variability in tree allometry determines light resource allocation in forest ecosystems: a hierarchical Bayesian approach, 0, 2010
Vieilledent, G. and Courbaud, B. and Kunstler, G. and Dh{\^o}te, J.F. and Clark, J.S., Oecologia. 163 vol. (3); pp. 759--773

COS 87-4: Hybridization in two mixed-species red oak populations: Implications for response to global change, 0, 2010
Moran, E.V. and Willis, J. and Clark, J.S., The 95th ESA Annual Meeting.

Models for demography of plant populations, 0, 2010
Clark, JS; Bell, D; Dietze, M; Hersh, M; Ibanez, I; LaDeau, S; McMahon, S; Metcalf, J; Moran, E; Pangle, L; others, , The Oxford handbook of applied Bayesian analysis. Oxford University Press, New York, New York, USA. pp. 431-481

Assimilating multi-source uncertainties of a parsimonious conceptual hydrological model using hierarchical Bayesian modeling, 2011
Wu, W; Clark, JS; Vose, JM, Journal of Hydrology. (2011) 394 vol. (3-4); pp. 436-446

Greater seed production in elevated CO<sub>2</sub> is not accompanied by reduced seed quality in Pinus taeda L., 0, 2010
Way, DA; Ladeau, SL; McCarthy, HR; Clark, JS; Oren, R; Finzi, AC; Jackson, RB, Global Change Biology. 16 vol. (3); pp. 1046-1056

Individual variability in tree allometry determines light resource allocation in forest ecosystems: A hierarchical Bayesian approach, 0, 2010
Vieilledent, G; Courbaud, B; Kunstler, G; Dhôte, J-F; Clark, JS, Oecologia. 163 vol. (3); pp. 759-773

Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep., 5, 2009
Colchero, F; Medellin, RA; Clark, JS; Lee, R; Katul, GG, Journal of Animal Ecology. 78 vol. (3); pp. 666-673

A predictive framework to understand forest responses to global change., 4, 2009
McMahon, SM; Dietze, MC; Hersh, MH; Moran, EV; Clark, JS, Annals of the New York Academy of Sciences. 1162 vol. (1); pp. 221-236

Beyond neutral science., 1, 2009
Clark, JS, Trends in Ecology & Evolution. 24 vol. (1); pp. 8-15

Beyond neutral science, 2009
Clark, J.S., Trends Ecol Evol. (2009) pp. 8-15

Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L., 0, 2009
WAY, D.A. and LADEAU, S.L. and MCCARTHY, H.R. and CLARK, J.S. and OREN, RAM and FINZI, A.C. and JACKSON, R.B., Global Change Biology. 16 vol. (3); pp. 1046--1056

Accounting for uncertainty in ecological analysis: the strengths and limitations of hierarchical statistical modeling, 0, 2009
Cressie, N. and Calder, C.A. and Clark, J.S. and Hoef, J.M.V. and Wikle, C.K., Ecological Applications. 19 vol. (3); pp. 553--570

Tree growth inference and prediction when the point of measurement changes: modelling around buttresses in tropical forests, 0, 2009
Metcalf, C.J.E. and Clark, J.S. and Clark, D.A., Journal of Tropical Ecology. 25 vol. (01); pp. 1--12

Overcoming data sparseness and parametric constraints in modeling of tree mortality: a new nonparametric Bayesian model, 0, 2009
Metcalf, C.J.E.M.C.J.E. and McMahon, S.M.M.M.S.M. and Clark, J.S.C.J.S., Canadian Journal of Forest Research. 39 vol. (9); pp. 1677--1687

Biases in the estimation of size-dependent mortality models: advantages of a semiparametric approach, 0, 2009
Vieilledent, G.V.G. and Courbaud, B.C.B. and Kunstler, G.K.G. and Jean-Fran{\c{c}}ois Dh{\^o}te, J.F.D. and Clark, J.S.C.J.S., Canadian Journal of Forest Research. 39 vol. (8); pp. 1430--1443

Beyond neutral science, 0, 2009
Clark, J.S., Trends in Ecology \& Evolution. 24 vol. (1); pp. 8--15

Visitor perceptions of ecological design at the Crosby Arboretum, Picayune, Mississippi, 0, 2009
Brzuszek, RF; Clark, J, Native Plants Journal. 10 vol. (2); pp. 91-105

Inference in incidence, infection, and impact: Co-infection of multiple hosts by multiple pathogens, 0, 2009
Clark, JS; Hersh, MH, Bayesian Analysis. 4 vol. (2); pp. 337-366

Estimating colonization potential of migrant tree species, 0, 2009
Ibáñez, I; Clark, JS; Dietze, MC, Global Change Biology. 15 vol. (5); pp. 1173-1188

Accounting for uncertainty in ecological analysis: The strengths and limitations of hierarchical statistical modeling, 0, 2009
Cressie, N; Calder, CA; Clark, JS; Hoef, JMV; Wikle, CK, Ecological Applications. 19 vol. (3); pp. 553-570

Estimating performance of potential migrant species, 0, 2009
Ibáñez, ; I, ; Clark, ; S, J; Dietze, , Global Change Biology.

Tree growth inference and prediction when the point of measurement changes: Modelling around buttresses in tropical forests, 0, 2009
Metcalf, CJE; Clark, JS; Clark, DA, Journal of Tropical Ecology. 25 vol. (1); pp. 1-12

Biases in the estimation of size-dependent mortality models: Advantages of a semiparametric approach, 0, 2009
Vieilledent, G; Courbaud, B; Kunstler, G; Dhôte, J-F; Clark, JS, Canadian Journal of Forest Research. 39 vol. (8); pp. 1430-1443

Overcoming data sparseness and parametric constraints in modeling of tree mortality: A new nonparametric Bayesian model, 0, 2009
Metcalf, CJE; McMahon, SM; Clark, JS, Canadian Journal of Forest Research. 39 vol. (9); pp. 1677-1687

Striking the right balance in right whale conservation, 0, 2009
Schick, RS; Halpin, PN; Read, AJ; Slay, CK; Kraus, SD; Mate, BR; Baumgartner, MF; Roberts, JJ; Best, BD; Good, CP; Loarie, SR; Clark, JS, Canadian Journal of Fisheries and Aquatic Sciences. 66 vol. (9); pp. 1399-1403

Inference when multiple pathogens affect multiple hosts: Bayesian model selection, 0, 2009
Clark, JS; Hersh, MH, bayesian analysis.

Greater seed production in elevated CO2 is not accompanied by reduced seed quality in Pinus taeda L, 0, 2009
Way, D.A., S. L. LaDeau, H. R. McCarthy, J. S. Clark, R. Oren, A. C. Finzi and R. B. Jackson, Ecological Society of America Annual Meeting.

Striking the right balance in right whale conservation, 0, 2009
Schick, R.S., P. N. Halpin, A. J. Read, C. K. Slay, S. D. Kraus, B. R. Mate, M. F. Baumgartner, J. J. Roberts, B. D. Best, C. P. Good, S. R. Loarie, and J. S. Clark, Canadian Journal of Fisheries and Aquatic Sciences.

Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep, 0, 2009
Colchero, F., R. A. Medellin, J. S. Clark, R. Lee, and G. G. Katul,

Understanding movement data and movement processes: current and emerging directions., 12, 2008
Schick, RS; Loarie, SR; Colchero, F; Best, BD; Boustany, A; Conde, DA; Halpin, PN; Joppa, LN; McClellan, CM; Clark, JS, Ecology Letters. 11 vol. (12); pp. 1338-1350

Evaluating the sources of potential migrant species: implications under climate change., 10, 2008
Ibáñez, I; Clark, JS; Dietze, MC, Ecological Applications. 18 vol. (7); pp. 1664-1678

Converting raw data into ecologically meaningful products, 0, 2008
Hui, D; Luo, Y; Schimel, D; Clark, JS; Hasting, A; Ogle, K; Williams, M, Eos. 89 vol. (5); pp. 39-

Capturing diversity and interspecific variability in allometries: A hierarchical approach, 0, 2008
Dietze, MC; Wolosin, MS; Clark, JS, Forest Ecology and Management. 256 vol. (11); pp. 1939-1948

New episodes of volcanism at Kilauea Volcano, Hawaii, 0, 2008
Poland, M; Miklius, A; Orr, T; Sutton, J; Thornber, C; Wilson, C; Hui, D; Luo, Y; Schimel, D; Clark, JS; others, , Eos. 89 vol. (5); pp. 37-38

Changes in fire regimes since the Last Glacial Maximum: an assessment based on a global synthesis and analysis of charcoal data, 0, 2008
Power, MJ; Marlon, J; Ortiz, N; Bartlein, PJ; Harrison, SP; Mayle, FE; Ballouche, A; Bradshaw, RHW; Carcaillet, C; Cordova, C; others, , Climate Dynamics. 30 vol. (7); pp. 887-907

Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO<sub>2</sub>: Reply, 0, 2008
Mohan, JE; Ziska, LH; Thomas, RB; Sicher, RC; George, K; Clark, JS; Schlesinger, WH, Ecology. 89 vol. (2); pp. 585-587

Understanding movement data and processes: emerging techniques, 0, 2008
Schick, RS; Loarie, SR; Colchero, F; Best, BD; Boustany, A; Conde, DA; Halpin, PN; Joppa, LN; McClellan, CM; Clark, JS, Ecol Letters.

Rethinking gap dynamics: the impact of damaged trees and sprouts, 2008
Dietze, M; Clark, JS, Ecol Monog. (2008) pp. 331-347

Changing the gap dynamics paradigm: Vegetative regeneration control on forest response tO disturbance, 2007
Dietze, MC; Clark, JS, Ecological Monographs. (2007) 78 vol. (3); pp. 331-347

Tree allometries: capturing diversity using a Hierarchical Bayes approach. Forest Ecology and Management, 0, 2008
Dietze, M., M. Wolosin, J. S. Clark, 256 pp. 1939-1948

Models for demography of plant populations, 0, 2008
Clark, J.S., D. Bell, M.l Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. McMahon, J. Metcalf, E. Moran, L. Pangle, and M. Wolosin,

Predicting population survival under future climate change: density dependence, drought and extraction in an insular bighorn sheep, 0, 2008
Colchero, F., R. A. Medellin, J. S. Clark, R. Lee, and G. G. Katul, Journal of Animal Ecology. pp. 666-673

Tree growth inference and prediction when the point of measurement changes: modelling around buttresses in tropical forests, 0, 2008
Metcalf, C.J.E., J. S. Clark, and D. A. Clark, Journal of Tropical Ecology.

Estimating performance of potential migrant species, 0, 2008
Ibáñez, I., Clark, J.S. and Dietze, M., Global Change Biology.

Ecosystem sensitivity to climate change and complex responses, 0, 2008
Clark, J.S. and Wyman, R.L.,

Changing the gap dynamics paradigm: vegetative regeneration control on forest response to disturbance, 0, 2008
Dietze, M.C. and Clark, J.S., Ecological Monographs. 78 vol. (3); pp. 331--347

Inferring long-distance dispersal and topographic barriers during post-glacial colonization from the genetic structure of red maple (Acer rubrum L.) in New England, 0, 2008
Gugger, P.F. and McLachlan, J.S. and Manos, P.S. and Clark, J.S., Journal of Biogeography. 35 vol. (9); pp. 1665--1673

Evaluating the sources of potential migrant species: implications under climate change, 0, 2008
Ib{\'a}{\~n}ez, I. and Clark, J.S. and Dietze, M.C., Ecological Applications. 18 vol. (7); pp. 1664--1678

Changes in fire regimes since the last glacial maximum: An assessment based on a global synthesis and analysis of charcoal data, 0, 2008
Power, MJ; Marlon, J; Ortiz, N; Bartlein, PJ; Harrison, SP; Mayle, FE; Ballouche, A; Bradshaw, RHW; Carcaillet, C; Cordova, C; Mooney, S; Moreno, PI; Prentice, IC; Thonicke, K; Tinner, W; Whitlock, C; Zhang, Y; Zhao, Y; Ali, AA; Anderson, RS; Beer, R; Behling, H; Briles, C; Brown, KJ; Brunelle, A; Bush, M; Camill, P; Chu, GQ; Clark, J; Colombaroli, D; Connor, S; Daniau, A-L; Daniels, M; Dodson, J; Doughty, E; Edwards, ME; Finsinger, W; Foster, D; Frechette, J; Gaillard, M-J; Gavin, DG; Gobet, E et al., Climate Dynamics. 30 vol. (7-8); pp. 887-907

Resolving the biodiversity paradox., 2007
Clark, JS; Dietze, M; Chakraborty, S; Agarwal, PK; Ibanez, I; LaDeau, S; Wolosin, M, Ecology Letters. (2007) 10 vol. (8); pp. 647-659

Long-term CO2 enrichment of a forest ecosystem: implications for forest regeneration and succession., 6, 2007
Mohan, JE; Clark, JS; Schlesinger, WH, Ecological Applications. 17 vol. (4); pp. 1198-1212

Tree growth inference and prediction from diameter censuses and ring widths., 10, 2007
Clark, JS; Wolosin, M; Dietze, M; Ibáñez, I; LaDeau, S; Welsh, M; Kloeppel, B, Ecological Applications. 17 vol. (7); pp. 1942-1953

Exploiting temporal variability to understand tree recruitment response to climate change, 2007
Ibáñez, I; Clark, JS; LaDeau, S; Lambers, JHR, Ecological Monographs. (2007) 77 vol. (2); pp. 163-177

Tree growth inference and prediction from diameter censuses and ring widths. Ecological Applications, 2007
Clark, JS; Wolosin, M; Dietze, M; Ibanez, I; LaDeau, S; Welsh, M; Kloeppel, B, Ecol Appl. (2007) 17 pp. 1942-1953

A scalable algorithm for dispersing population, 2007
Govindarajan, S; Dietze, MC; Agarwal, PK; Clark, JS, Journal of Intelligent Information Systems. (2007) 29 vol. (1); pp. 39-61

From data reverence to data relevance: Model-mediated wireless sensing of the physical environment, 2007
Flikkema, P.G., P.J. K. Agarwal, J. S. Clark, C. Ellis, A. Gelfand, K. Munagala, and J. Yang, (2007) pp. 988–994

A scalable algorithm for dispersing population, 0, 2007
Govindarajan, S. and Dietze, M.C. and Agarwal, P.K. and Clark, J.S., Journal of Intelligent Information Systems. 29 vol. (1); pp. 39--61

Resolving the biodiversity paradox, 0, 2007
Clark, J.S. and Dietze, M. and Chakraborty, S. and Agarwal, P.K. and Ibanez, I. and LaDeau, S. and Wolosin, M., Ecology Letters. 10 vol. (8); pp. 647--659

Exploiting temporal variability to understand tree recruitment response to climate change, 0, 2007
Ib{\'a}{\~n}ez, I. and Clark, J.S. and LaDeau, S. and Lambers, J.H.R., Ecological Monographs. 77 vol. (2); pp. 163--177

From data reverence to data relevance: Model-mediated wireless sensing of the physical environment, 0, 2007
Flikkema, PG; Agarwal, PK; Clark, JS; Ellis, C; Gelfand, A; Munagala, K; Yang, J, Lecture notes in computer science. 4487 LNCS pp. 988-994

Rejoinder to Clark et al. (2007): Response to Chesson and Rees, 0, 2007
Clark, JS; Agarwal, PK, Ecology Letters. 10 vol. (8); pp. 661-662

Are They Getting It?, 0, 2007
Brzuszek, RF; Clark, J, Landscape Architecture. 97 vol. (5); pp. 78

Predicting biodiversity change: outside the climate envelope, beyond the species-area curve., 8, 2006
Ibáñez, I; Clark, JS; Dietze, MC; Feeley, K; Hersh, M; LaDeau, S; McBride, A; Welch, NE; Wolosin, MS, Ecology. 87 vol. (8); pp. 1896-1906

A future for models and data in environmental science., 7, 2006
Clark, JS; Gelfand, AE, Trends in Ecology & Evolution. 21 vol. (7); pp. 375-380

Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2., 2006
Mohan, JE; Ziska, LH; Schlesinger, WH; Thomas, RB; Sicher, RC; George, K; Clark, JS, Proceedings of the National Academy of Sciences of USA. (2006) 103 vol. (24); pp. 9086-9089

Climate implications of biomass burning since the 19th century in eastern North America, 0, 2006
Clark, J.S. and Stocks, B.J. and Richard, P.J.H., Global Change Biology. 2 vol. (5); pp. 433--442

Biomass and toxicity responses of poison ivy (Toxicodendron radicans) to elevated atmospheric CO2, 0, 2006
Mohan, J.E. and Ziska, L.H. and Schlesinger, W.H. and Thomas, R.B. and Sicher, R.C. and George, K. and Clark, J.S., Proceedings of the National Academy of Sciences. 103 vol. (24); pp. 9086--9089

Model-driven dynamic control of embedded wireless sensor networks, 0, 2006
Flikkema, PG; Agarwal, PK; Clark, JS; Ellis, C; Gelfand, A; Munagala, K; Yang, J, Lecture notes in computer science. 3993 LNCS - III pp. 409-416

The past 20 years of ecology and evolution, 0, 2006
Read, AF; Clark, JS, Trends in Ecology & Evolution. 21 vol. (6); pp. 287-

A guide to calculating discrete-time invasion rates from data, 0, 2006
Lewis, M; Neubert, M; Caswell, H; Clark, J; Shea, K, Conceptual ecology and invasion biology: reciprocal approaches to nature. pp. 169-192

The next 20 years of ecology and evolution, 0, 2006
Read, AF; Clark, JS, Trends in Ecology & Evolution. 21 vol. (7); pp. 354-355

Synthesizing ecological experiments and observational data with hierarchical Bayes, 0, 2006
Clark, JS; LaDeau, S, Hierarchical models of the environment. Oxford University Press, Oxford, UK. pp. 41-58

Elevated CO<sub>2</sub> and tree fecundity: The role of tree size, interannual variability, and population heterogeneity, 0, 2006
LaDeau, SL; Clark, JS, Global Change Biology. 12 vol. (5); pp. 822-833

Pollen production by Pinus taeda growing in elevated atmospheric CO <sub>2</sub>, 0, 2006
Ladeau, SL; Clark, JS, Functional Ecology. 20 vol. (3); pp. 541-547

A future for models and data in ecology, 2006
Clark, JS; Gelfand, AE, Trends Ecol Evol. (2006) pp. 375-380

Uncertainty in population growth rates calculated from demography: the hierarchical approach, 0, 2005
Clark, JS, Ecology. 84 pp. 1370-1381

Why environmental scientists are becoming Bayesians, 2005
Clark, JS, Ecology Letters. (2005) 8 vol. (1); pp. 2-14

Fire cycles in North American interior grasslands and their relation to prairie drought, 0, 2005
Brown, KJ and Clark, JS and Grimm, EC and Donovan, JJ and Mueller, PG and Hansen, BCS and Stefanova, I., Proceedings of the National Academy of Sciences of the United States of America. 102 vol. (25); pp. 8865--8870

Molecular indicators of tree migration capacity under rapid climate change, 0, 2005
McLachlan, J.S. and Clark, J.S. and Manos, P.S., Ecology. 86 vol. (8); pp. 2088--2098

The benefits of seed banking for red maple (Acer rubrum): maximizing seedling recruitment, 0, 2005
Lambers, J.H.R. and Clark, J.S., Canadian Journal of Forest Research. 35 vol. (4); pp. 806--813

Hierarchical Bayes for structured, variable populations: from recapture data to life-history prediction, 0, 2005
Clark, J.S. and Ferraz, G. and Oguge, N. and Hays, H. and DiCostanzo, J., Ecology. 86 vol. (8); pp. 2232--2244

Does predation contribute to tree diversity?, 0, 2005
Beckage, B; Clark, JS, Oecologia. 143 vol. (3); pp. 458-469

Survival of tree seedlings across space and time: Estimates from long-term count data, 0, 2005
Beckage, B; Lavine, M; Clark, JS, Journal of Ecology. 93 vol. (6); pp. 1177-1184

Implications of seed banking for recruitment of southern Appalachian woody species, 0, 2005
Lambers, JHR; Clark, JS; Lavine, M, Ecology. 86 vol. (1); pp. 85-95

Tree growth prediction using size and exposed crown area, 0, 2005
Wyckoff, PH; Clark, JS, Canadian Journal of Forest Research. 35 vol. (1); pp. 13-20

Neutral theory (communication arising): The stability of forest biodiversity, 2004
Clark, JS, Nature. (2004) 427 pp. 696-697

Fecundity of trees and the colonization-competition hypothesis, 2004
Clark, JS; LaDeau, S; Ibanez, I, Ecological Monographs. (2004) 74 vol. (3); pp. 415-442

Population time series: Process variability, observation errors, missing values, lags, and hidden states, 2004
Clark, JS; Bjørnstad, ON, Ecology. (2004) 85 vol. (11); pp. 3140-3150

Why environmental scientists are becoming Bayesians, 0, 2004
Clark, J.S., Ecology letters. 8 vol. (1); pp. 2--14

Reconstructing historical ranges with fossil data at continental scales, 2004
McLachlan, JS; Clark, JS, Forest Ecology and Management. (2004) 197 vol. (1-3); pp. 139-147

Population time series: process variability, observation errors, missing values, lags, and hidden states, 0, 2004
Clark, J.S. and Bj{\o}rnstad, O.N., Ecology. 85 vol. (11); pp. 3140--3150

Charcoal production, dispersal, and deposition from the Fort Providence experimental fire: interpreting fire regimes from charcoal records in boreal forests, 0, 2004
Lynch, J.A. and Clark, J.S. and Stocks, B.J., Canadian Journal of Forest Research. 34 vol. (8); pp. 1642--1656

Neutral theory (communication arising): The stability of forest biodiversity, 0, 2004
Clark, J.S. and McLachlan, J.S., Nature. 427 vol. (6976); pp. 696--697

Reconstructing historical ranges with fossil data at continental scales, 0, 2004
McLachlan, J.S. and Clark, J.S., Forest Ecology and Management. 197 vol. (1); pp. 139--147

Fecundity of trees and the colonization-competition hypothesis, 0, 2004
Clark, J.S. and LaDeau, S. and Ibanez, I., Ecological Monographs. 74 vol. (3); pp. 415--442

Genetic variation in germination, growth, and survivorship of red maple in response to subambient through elevated atmospheric CO2, 0, 2004
Mohan, J.E. and Clark, J.S. and Schlesinger, W.H., Global Change Biology. 10 vol. (2); pp. 233--247

The stability of forest biodiversity: Commentary, 0, 2004
Clark, JS; McLachlan, JS, Nature. 427 vol. (6976); pp. 696-697

A scalable simulator for forest dynamics, 0, 2004
Govindarajan, S; Dietze, M; Agarwal, PK; Clark, JS, Proceedings of the Annual Symposium on Computational Geometry. pp. 106-115

Reid’s Paradox: Tree migration capacity and rapid climate change, 2004
J.S. Clark, (2004)

Charcoal production, dispersal, and deposition from the Fort Providence experimental fire: Interpreting fire regimes from charcoal records in boreal forests, 2004
Lynch, JA; Clark, JS; Stocks, BJ, Canadian Journal of Forest Research. (2004) 34 vol. (8); pp. 1642-1656

Genetic variation in germination, growth, and survivorship of red maple in response to subambient through elevated atmospheric CO<sub>2</sub>, 2004
Mohan, JE; Clark, JS; Schlesinger, WH, Global Change Biology. (2004) 10 vol. (2); pp. 233-247

Seedling survival and growth in Southern Appalachian forests: Does spatial heterogeneity maintain species diversity, 2003
Beckage, B; Clark, JS, Ecology. (2003) 84 pp. 1849-1861

Stability of forest biodiversity., 2003
Clark, JS; McLachlan, JS, Nature. (2003) 423 vol. (6940); pp. 635-638

Incorporating multiple sources of stochasticity in population dynamic models, 2003
Calder, ; Lavine, KM; Mueller, P; Clark, JS, Ecology. (2003) 84 pp. 1395-1402

Uncertainty in ecological inference and forecasting. (Special Feature), 2003
Clark, JS, Ecology. (2003) 84 vol. (6); pp. 1370-1381

Uncertainty in population growth rates calculated from demography: the hierarchical approach, 2003
Clark, JS, Ecology. (2003) 84 pp. 1349-1360

Spatial and temporal variation in boreal fire, 2003
Lynch, JA; Bigelow, B; Clark, JS; Edwards, M; Finney, B, Journal of Geophysical Research. (2003) 108 pp. 8152-8169

Effects of dispersal, shrubs, and density-dependent mortality on seed and seedling distributions in temperate forests, 0, 2003
Lambers, J.H.R. and Clark, J.S., Canadian Journal of Forest Research. 33 vol. (5); pp. 783--795

Coexistence: how to identify trophic trade-offs, 0, 2003
Clark, J.S. and Mohan, J. and Dietze, M. and Ibanez, I., Ecology. 84 vol. (1); pp. 17--31

Uncertainty in Ecological Inference and Forecasting 1, 0, 2003
Clark, J.S., Ecology. 84 vol. (6); pp. 1349--1350

Incorporating multiple sources of stochasticity into dynamic population models, 0, 2003
Calder, C; Lavine, M; Müller, P; Clark, JS, Ecology. 84 vol. (6); pp. 1395-1402

Uncertainty in Ecological Inference and Forecasting, 0, 2003
Clark, JS, Ecology. 84 vol. (6); pp. 1349-1350

Seedling survival and growth of three forest tree species: The role of spatial heterogeneity, 0, 2003
Beckage, B; Clark, JS, Ecology. 84 vol. (7); pp. 1849-1861

Coexistence: How to identify trophic trade-offs, 2003
Clark, JS; Mohan, J; Dietze, M; Ibanez, I, Ecology. (2003) 84 vol. (1); pp. 17-31

Estimating population spread: What can we forecast and how well?, 2003
Clark, JS; Lewis, M; McLachlan, JS; HilleRisLambers, J, Ecology. (2003) 84 vol. (8); pp. 1979-1988

Geographic and temporal variations in fire history in boreal ecosystems of Alaska, 0, 2003
Lynch, JA; Clark, JS; Bigelow, NH; Edwards, ME; Bruce, PFBP, Journal of Geophysical Research D: Atmospheres. 108 vol. (1); pp. FFR 8-1 FFR 8-17

Effects of dispersal, shrubs, and density-dependent mortality on seed and seedling distributions in temperate forests, 2003
Lambers, JHR; Clark, JS, Canadian Journal of Forest Research. (2003) 33 vol. (5); pp. 783-795

Uncertainty and variability in demography and population growth: A hierarchical approach, 0, 2003
Clark, JS, Ecology. 84 vol. (6); pp. 1370-1381

Forecasting plant migration rates: Managing uncertainty for risk assessment, 2003
Higgins, SI; Clark, JS; Nathan, R; Hovestadt, T; Schurr, F; Fragoso, JMV; Aguiar, MR; Ribbens, E; Lavorel, S, Journal of Ecology. (2003) 91 vol. (3); pp. 341-347

Forecasting plant migration rates: managing uncertainty for risk assessment, 0, 2003
Higgins, SI and Clark, JS and Nathan, R. and Hovestadt, T. and Schurr, F. and Fragoso, JMV and Aguiar, MR and Ribbens, E. and Lavorel, S., Journal of Ecology. 91 vol. (3); pp. 341--347

Estimating population spread: what can we forecast and how well?, 0, 2003
Clark, J.S. and Lewis, M. and McLachlan, J.S. and HilleRisLambers, J., Ecology. 84 vol. (8); pp. 1979--1988

Stability of forest biodiversity, 0, 2003
Clark, J.S. and McLachlan, J.S. and others, Nature. 423 vol. (6940); pp. 635--638

Growth and mortality for seven co-occurring tree species in the southern Appalachian Mountains: implications for future forest composition, 2002
Wyckoff, PH; Clark, JS, Journal of Ecology. (2002) 90 pp. 604-615

Density-dependent mortality and the latitudinal gradient in species diversity., 2002
Lambers, JHR; Clark, JS; Beckage, B, Nature. (2002) 417 vol. (6890); pp. 732-735

Dispersal and plant migration, 2002
Clark, J.S., B. Beckage, J. Hille Ris Lambers, I. Ibanez, S. LaDeau, J. MacLachlan, J. Mohan, and M. Rocca, (2002) 3 pp. 81-93

Spatial variability in fire regimes: its effects on recent and past vegetation, 2002
Clark, J.S., A. M. Gill, and A. P. Kershaw, (2002) pp. 125-144

A history of fire in Australia, 2002
Kershaw, A. P., Clark, J.S., A. M. gill, and D. M. D'Costa, (2002)

Indirect effects of heavy metals on parasites may cause shifts in snail species compositions, 0, 2002
Lefcort, H; Aguon, MQ; Bond, KA; Chapman, KR; Chaquette, R; Clark, J; Kornachuk, P; Lang, BZ; Martin, JC, Archives of Environmental Contamination and Toxicology. 43 vol. (1); pp. 34-41

A history of fire in Australia, 0, 2002
Kershaw, AP; Clark, JS; Gill, AM; D’Costa, DM, Flammable Australia: the fire regimes and biodiversity of a continent. pp. 3-25

The relationship between growth and mortality for seven co-occurring tree species in the southern Appalachian Mountains, 0, 2002
Wyckoff, PH; Clark, JS, Journal of Ecology. 90 vol. (4); pp. 604-615

Geographic and temporal variations in fire history in boreal ecosystems of Alaska, 0, 2002
Lynch, JA; Clark, JS; Bigelow, NH; Edwards, ME; Finney, BP, Journal of Geophysical Research. 107 vol. (D1); pp. 8152

Statistical modeling of seedling mortality, 2002
Lavine, M; Beckage, B; Clark, JS, Journal of Agricultural, Biological, and Environmental Statistics. (2002) 7 vol. (1); pp. 21-41

Drought cycles and landscape responses to past aridity on prairies of the northern Great Plains, USA, 2002
Clark, JS; Grimm, EC; Donovan, JJ; Fritz, SC; Engstrom, DR; Almendinger, JE, Ecology. (2002) 83 vol. (3); pp. 595-601

Computation and uncertainty in ecological forecasting, 0, 2002
Clark, J.S. and Agarwal, P. and Lavine, M., pp. 1--1

Fire and vegetation histories in the southern Appalachian Mountains: the historical importance of fire before and after European/American settlement, 0, 2002
Lynch, J.A. and Clark, J.S., A report submitted to the George Washington and Jefferson National Forest, Roanoke, Virginia, USA.

Statistical modeling of seedling mortality, 0, 2002
Lavine, M. and Beckage, B. and Clark, J.S., Journal of agricultural, biological, and environmental statistics. 7 vol. (1); pp. 21--41

Drought cycles and landscape responses to past aridity on prairies of the northern Great Plains, USA, 0, 2002
Clark, J.S. and Grimm, E.C. and Donovan, J.J. and Fritz, S.C. and Engstrom, D.R. and Almendinger, J.E., Ecology. 83 vol. (3); pp. 595--601

Density-dependent mortality and the latitudinal gradient in species diversity, 0, 2002
Lambers, J.H.R. and Clark, J.S. and Beckage, B. and others, Nature. 417 vol. (6890); pp. 732--735

Ecological forecasts: an emerging imperative., 2001
Clark, JS; Carpenter, SR; Barber, M; Collins, S; Dobson, A; Foley, JA; Lodge, DM; Pascual, M; Pielke, R; Pizer, W; Pringle, C; Reid, WV; Rose, KA; Sala, O; Schlesinger, WH; Wall, DH; Wear, D, Science. (2001) 293 vol. (5530); pp. 657-660

Invasion by extremes: population spread with variation in dispersal and reproduction., 5, 2001
Clark, JS; Lewis, M; Horvath, L, American Naturalist. 157 vol. (5); pp. 537-554

Invasion by extremes: variation in dispersal and reproduction retards population spread, 2001
Clark, JS; Lewis, M; Horvath, L, American Naturalist. (2001) 157 pp. 537-554

Rising CO2 levels and the fecundity of forest trees., 2001
LaDeau, SL; Clark, JS, Science. (2001) 292 vol. (5514); pp. 95-98

Global environmental change: effects on biodiversity, 2001
Schlesinger, W.H., J.S. Clark, J.E. Mohan and C.D. Reid, (2001) pp. 175-224

Effects of holocene climate change on the C-4 grassland/woodland boundary in the Northern Plains, USA, 2001
Clark, JS; Grimm, EC; Lynch, J; Mueller, PG, Ecology. (2001) 82 vol. (3); pp. 620-636

Bayesian statistics in ecology, 2001
Clark, J.S. and M. Lavine, (2001) pp. 327–346

Effects of Holocene climate change on the C<sub>4</sub> grassland/woodland boundary in the Northern Plains, USA, 0, 2001
Clark, JS; Grimm, EC; Lynch, J; Mueller, PG, Ecology. 82 vol. (3); pp. 620-636

Rising CO<sub>2</sub> levels and the fecundity of forest trees, 0, 2001
LaDeau, SL; Clark, JS, Science. 292 vol. (5514); pp. 95-98

Bayesian statistics: estimating plant demographic parameters, 0, 2001
Clark, JS; Lavine, M, Notes.

Effec1s on Biodiversi1y, 0, 2001
Schlesinger, WH; Clark, JS; Moban, JE; Reid, CD, Conservation biology: research priorities for the next decade. pp. 175

On the estimation of spread rate for a biological population, 2001
Clark, J; Horváth, L; Lewis, M, Statistics and Probability Letters. (2001) 51 vol. (3); pp. 225-234

Changes in biomass, aboveground net primary production, and peat accumulation following permafrost thaw in the boreal peatlands of Manitoba, Canada, 2001
Camill, P; Lynch, JA; Clark, JS; Adams, JB; Jordan, B, Ecosystems. (2001) 4 vol. (5); pp. 461-478

Ecological forecasts: an emerging imperative, 0, 2001
Clark, J.S. and Carpenter, S.R. and Barber, M. and Collins, S. and Dobson, A. and Foley, J.A. and Lodge, D.M. and Pascual, M. and Pielke Jr, R. and Pizer, W. and others, Science. 293 vol. (5530); pp. 657--660

On the estimation of spread rate for a biological population, 0, 2001
Clark, J. and Horv{\'a}th, L. and Lewis, M., Statistics \& probability letters. 51 vol. (3); pp. 225--234

Changes in biomass, aboveground net primary production, and peat accumulation following permafrost thaw in the boreal peatlands of Manitoba, Canada, 0, 2001
Camill, P. and Lynch, J.A. and Clark, J.S. and Adams, J.B. and Jordan, B., Ecosystems. 4 vol. (5); pp. 461--478

Complex long-term climate responses of North American boreal forest and savanna, 2000
Camill, P; Clark, JS, Ecosystems. (2000) 3 pp. 534-544

Biological indices of soil quality: An ecosystem case study of their use, 2000
Knoepp, JD; Coleman, DC; Jr, DAC; Clark, JS, Forest Ecology and Management. (2000) 138 vol. (1-3); pp. 357-368

Predicting tree mortality from diameter growth: A comparison of maximum likelihood and Bayesian approaches, 2000
Wyckoff, PH; Clark, JS, Canadian Journal of Forest Research. (2000) 30 vol. (1); pp. 156-167

A long-term study of tree seedling recruitment in southern Appalachian forests: The effects of canopy gaps and shrub understories, 2000
Beckage, B; Clark, JS; Clinton, BD; Haines, BL, Canadian Journal of Forest Research. (2000) 30 vol. (10); pp. 1617-1631

Biological indices of soil quality: an ecosystem case study of their use, 0, 2000
Knoepp, J.D. and Coleman, D.C. and Crossley Jr, DA and Clark, J.S., Forest Ecology and Management. 138 vol. (1); pp. 357--368

A long-term study of tree seedling recruitment in southern Appalachian forests: the effects of canopy gaps and shrub understories, 0, 2000
Beckage, B. and Clark, J.S. and Clinton, B.D. and Haines, B.L., Canadian Journal of Forest Research. 30 vol. (10); pp. 1617--1631

Predicting tree mortality from diameter growth: a comparison of maximum likelihood and Bayesian approaches, 0, 2000
Wyckoff, P.H. and Clark, J.S., Canadian Journal of Forest Research. 30 vol. (1); pp. 156--167

Long-term perspectives on lagged ecosystem responses to climate change: Permafrost in boreal peatlands and the grassland/woodland boundary, 0, 2000
Camill, P; Clark, JS, Ecosystems. 3 vol. (6); pp. 534-544

Interpreting recruitment limitation in forests., 1999
Clark, JS; Beckage, B; Camill, P; Cleveland, B; Hillerislambers, J; Lichter, J; McLachlan, J; Mohan, J; Wyckoff, P, American journal of botany. (1999) 86 vol. (1); pp. 1-16

Seed dispersal near and far: Patterns across temperate and tropical forests, 1999
Clark, JS; Silman, M; Kern, R; Macklin, E; Hillerislambers, J, Ecology. (1999) 80 vol. (5); pp. 1475-1494

Interpreting recruitment limitation in forests, 0, 1999
Clark, JS and Beckage, B. and Camill, P. and Cleveland, B. and HilleRisLambers, J. and Lichter, J. and McLachlan, J. and Mohan, J. and Wyckoff, P., American Journal of Botany. 86 vol. (1); pp. 1--16

Seed dispersal near and far: patterns across temperate and tropical forests, 0, 1999
Clark, J.S. and Silman, M. and Kern, R. and Macklin, E. and HilleRisLambers, J., Ecology. 80 vol. (5); pp. 1475--1494

Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord., 1998
Clark, JS, American Naturalist. (1998) 152 vol. (2); pp. 204-224

Climate change disequilibrium of boreal permafrost peatlands caused by local processes., 1998
Camill, P; Clark, JS, American Naturalist. (1998) 151 vol. (3); pp. 207-222

Effects of climate and atmospheric CO2 partial pressure on the global distribution of C4 plants: past, present, and future, 1998
Collatz, G.J., J.A. Berry, and J. S. Clark, (1998) 114 pp. 441-454

Stages and spatial scales of recruitment limitation in southern appalachian forests, 1998
Clark, JS; Macklin, E; Wood, L, Ecological Monographs. (1998) 68 vol. (2); pp. 213-235

Relationships between charcoal particles in air and sediments in west-central Siberia, 1998
Clark, JS; Lynch, J; Stocks, BJ; Goldammer, JG, Holocene. (1998) 8 vol. (1); pp. 19-29

Reid's paradox of rapid plant migration, 1998
Clark, JS; Fastie, C; Hurtt, G; Jackson, ST; Johnson, C; King, GA; Lewis, M; Lynch, J; Pacala, S; Prentice, C; Schupp, EW; III, TW; Wyckoff, P, BioScience (BioOne). (1998) 48 vol. (1); pp. 13-24

Climate change disequilibrium of boreal permafrost peatlands caused by local processes, 0, 1998
Camill, P. and Clark, J.S., The American Naturalist. 151 vol. (3); pp. 207--222

Reid's paradox of rapid plant migration, 0, 1998
Clark, J.S. and Fastie, C. and Hurtt, G. and Jackson, S.T. and Johnson, C. and King, G.A. and Lewis, M. and Lynch, J. and Pacala, S. and Prentice, C. and others, BioScience. 48 vol. (1); pp. 13--24

Stages and spatial scales of recruitment limitation in southern Appalachian forests, 0, 1998
Clark, J.S. and Macklin, E. and Wood, L., Ecological Monographs. 68 vol. (2); pp. 213--235

Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord, 0, 1998
Clark, J.S., The American Naturalist. 152 vol. (2); pp. 204--224

Relationships between charcoal particles in air and sediments in west-central Siberia, 0, 1998
Clark, J.S. and Lynch, J. and Stocks, B.J. and Goldammer, J.G., The Holocene. 8 vol. (1); pp. 19--29

Effects of climate and atmospheric CO<sub>2</sub> partial pressure on the global distribution of C<sub>4</sub> grasses: Present, past, and future, 0, 1998
Collatz, GJ; Berry, JA; Clark, JS, Oecologia. 114 vol. (4); pp. 441-454

Introduction to sediment records of biomass burning and global change, 1997
J.S. Clark, (1997) pp. 1-9

Background and local charcoal in sediments: scales of fire evidence in the paleorecord., 1997
J.S. Clark and W. A. Patterson, (1997) pp. 23-48

Plant Migration and Climate Change: A more realistic portrait of plant migration is essential to predicting biological responses to global warming in a world drastically altered by human activity, 0, 1997
Pitelka, L.F., American Scientist. 85 vol. (5); pp. 464--473

Facing short-term extrapolation with long-term evidence: Holocene fire in the north-eastern US forests, 0, 1997
Clark, J.S., Journal of Ecology. pp. 377--380

Background and local charcoal in sediments: scales of fire evidence in the paleorecord, 0, 1997
Clark, JS; Patterson, WA, NATO ASI SERIES I GLOBAL ENVIRONMENTAL CHANGE. 51 pp. 23-48

Plant migration and climate change, 1997
Pitelka, LF; Gardner, RH; Ash, J; Berry, S; Gitay, H; Noble, IR; Saunders, A; Bradshaw, RHW; Brubaker, L; Clark, JS; Davis, MB; Sugita, S; Dyer, JM; Hengeveld, R; Hope, G; Huntley, B; King, GA; Lavorel, S; Mack, RN; Malanson, GP; McGlone, M; Prentice, IC; Rejmanek, M, American scientist. (1997) 85 vol. (5); pp. 464-473

Characterization of particulate products of biomass combustion, 0, 1997
Novakov, T; Cachier, H; Clark, JS; Gaudichet, A; Macko, S; Masclet, P, NATO ASI SERIES I GLOBAL ENVIRONMENTAL CHANGE. 51 pp. 117-144

Facing short-term extrapolation with long-term evidence: Holocene fire in the north-eastern US forests, 1997
Clark, JS, Journal of Ecology. (1997) 85 vol. (3); pp. 377-380

The role of paleofire in boreal and other cool-coniferous forests, 1996
J.S. Clark and P. J. H. Richard, (1996) pp. 65-89

Terrestrial biotic responses to environmental change and feedbacks to climate, 1996
J.S. Clark, (1996) pp. 445-482

Fire in ecosystems of boreal Eurasia: the Bor Forest Island Fire Experiment Fire Research Campaign Asia - North (FIRESCAN), 1996
J.S. Clark, (1996) pp. 848-873

Baseline biomass burning emissions of eastern North America, 1996
J.S. Clark, (1996) pp. 750-757

Reconstruction of prehistoric fire regimes in East Africa by lake sediment analysis, 1996
Weiss, K. F., J. G. Goldammer, J. S. Clark, D. A. Livingstone, and M. O. Andreae, (1996)

Testing disturbance theory with long-term data: alternative life-history solutions to the distribution of events, 0, 1996
Clark, J.S., American naturalist. pp. 976--996

Estimating the mass flux of charcoal from sedimentary records: effects of particle size, morphology, and orientation, 0, 1996
Clark, J.S. and Hussey, T.C., The Holocene. 6 vol. (2); pp. 129--144

Local and regional sediment charcoal evidence for fire regimes in presettlement north-eastern North America, 0, 1996
Clark, J.S. and Royall, P.D., Journal of Ecology. pp. 365--382

Presettlement analogs for Quaternary fire regimes in eastern North America, 0, 1996
Clark, J.S. and Hussey, T. and Royall, P.D., Journal of Paleolimnology. 16 vol. (1); pp. 79--96

The role of paleofire in boreal and other cool-coniferous forests, 0, 1996
Clark, JS and Richard, PJH, FORESTRY SCIENCES. 48 pp. 65--89

Testing disturbance theory with long-term data: Alternative life- history solutions to the distribution of events, 1996
Clark, JS, American Naturalist. (1996) 148 vol. (6); pp. 976-996

Climate implications of biomass burning since the 19th century in eastern North America, 1996
Clark, JS; Stocks, BJ; Richard, PJH, Global Change Biology. (1996) 2 vol. (5); pp. 433-442

The role of fire during climate change in an eastern deciduous forest at Devil's Bathtub, New York, 1996
Clark, JS; Royall, PD; Chumbley, C, Ecology. (1996) 77 vol. (7); pp. 2148-2166

Local and regional sediment charcoal evidence for fire regimes in presettlement north-eastern North America, 1996
Clark, JS; Royall, PD, Journal of Ecology. (1996) 84 vol. (3); pp. 365-382

Disturbance and population structure on the shifting mosaic landscape, 0, 1996
Clark, JS, Ecosystem Management Selected Readings. Springer, New York. pp. 76-98

Presettlement analogs for quaternary fire regimes in eastern North America, 1996
Clark, JS; Hussey, T; Royall, PD, Journal of Paleolimnology. (1996) 16 vol. (1); pp. 79-96

The role of paleofire in boreal and other cool-coniferous forests, 0, 1996
Clark, JS; Richard, PJH, FIRE IN ECOSYSTEMS OF BOREAL EURASIA. 48 pp. 65-89

Estimating the mass flux of charcoal from sedimentary records: Effects of particle size, morphology, and orientation, 1996
Clark, JS; Hussey, TC, The Holocene. (1996) 6 vol. (2); pp. 129-144

Charcoal analysis of varved lake sediments, 1995
Wright, H. E., and J. S. Clark, Laminated Sediments and Archaeology, Journal of the European Study Group on Physical, Chemical, Mathematical and Biological Techniques Applied to Archaeology. (1995) pp. 125-130

Particle-size evidence for source areas of charcoal accumulation in late Holocene sediments of eastern North American lakes, 0, 1995
Clark, J.S. and Royall, P.D., Quaternary Research. 43 vol. (1); pp. 80--89

Transformation of a northern hardwood forest by aboriginal (Iroquois) fire: charcoal evidence from Crawford Lake, Ontario, Canada, 0, 1995
Clark, J.S. and Royall, P.D., The Holocene. 5 vol. (1); pp. 1--9

Fecundity and dispersal in plant populations: implications for structure and diversity, 0, 1995
Clark, J.S. and Ji, Y., American Naturalist. pp. 72--111

Particle-Size Evidence for Source Areas of Charcoal Accumulation in Late Holocene Sediments of Eastern North American Lakes, 1995
Clark, JS; Royall, PD, Quaternary Research. (1995) 43 vol. (1); pp. 80-89

Transformation of a northern hardwood forest by aboriginal (Iroquois) fire: Charcoal evidence from Crawford Lake, Ontario, Canada, 1995
Clark, JS; Royall, PD, Holocene. (1995) 5 vol. (1); pp. 1-9

Fecundity and dispersal in plant populations: Implications for structure and diversity, 1995
Clark, JS; Yuan, J, American Naturalist. (1995) 146 vol. (1); pp. 72-111

Biochemical bases for the biogeography of C3/C4 grasses and implications for changing distributions since the last glacial maximum, 0, 1995
Collatz, GJ; Clark, JS; Berry, JA, Bulletin of the Ecological Society of America. 76 vol. (CONF-9507129--);

Climate and Indian effects on southern Ontario forests: a reply to Campbell and McAndrews, 0, 1995
Clark, JS, The Holocene. 5 vol. (3); pp. 371-379

Climate and Indian effects on southern Ontario forests: forum, 1995
J.S. Clark, (1995) 5 pp. 371-379

Fire in boreal ecosystems of Eurasia: first results of the Bor Forest Island Fire Experiment, Fire Research Campaign Asia-North (FIRESCAN), 1994
Clark, JS, Journal of World Resources Review. (1994) pp. 499-519

Pre-industrial particulate emissions and carbon sequestration from biomass burning in North America, 1994
Clark, JS; Royall, PD, Biogeochemistry. (1994) 23 pp. 1-17

Charcoal analysis of varved lake sediments, 0, 1994
Wright, HE; Clark, JS, PACT. pp. 125-130

Pre-industrial particulate emissions and carbon sequestration from biomass burning in North America, 0, 1994
Clark, JS; Royall, PD, Biogeochemistry. 24 vol. (1); pp. 35-51

Sensitivity of forest communities to global climate change, 1993
J.S. Clark, (1993) pp. 315-332

Functional groups and ecological consistencies: population perspectives on regional forest dynamics, 1993
J.S. Clark, (1993) pp. 255-286

Paleoecology of Fire, 1993
J.S. Clark and J. Robinson, (1993) pp. 193-214

Fire, climate, and forest processes during the last 2000 years, 1993
J.S. Clark, (1993) pp. 295-308

Shifting mosaic population dynamics, 1993
J.S. Clark, (1993)

Impacts of fires on ecosystems, 1993
Binkley, D., P. Becker-Heidman, J.S. Clark, P.J. Crutzen, P. Frost, A.M. Gill, A. Granström, F. Mack, J.–C. Menaut, R.W. Wein, and B. van Wilgren, (1993) pp. 359-374

Scale relationships in boreal forest, 1993
Clark, JS, Trends in Ecology and Evolution. (1993) 8 pp. 220

Sensitivity of unmanaged ecosystems to global change, 1993
J.S. Clark and Reid, C.D., Non-linear Responses to Global Change, Resources for the Future. (1993) pp. 53-89

Geological Society of America Special Paper 276 I993, 0, 1993
Clark, JS, Elk Lake, Minnesota: evidence for rapid climate change in the north-central United States. pp. 295

Shifting mosaic metapopulation dynamics, 0, 1993
Clark, JS, Lecture notes in biomathematics. 96 pp. 224-246

Scaling at the population level: Effects of species composition and population structure, 0, 1993
Clark, JS, Scaling Physiological Processes: Leaf to Globe. pp. 255-281

Paleoecology of fire, 0, 1993
Clark, JS; Robinson, J, Wiley, New York. pp. 193-214

Ecological and evolutionary consequences of patchiness: a marine--terrestrial perspective, 0, 1993
Marquet, PA; Fortin, MJ; Pineda, J; Wallin, DO; Clark, J; Wu, Y; Bollens, S; Jacobi, CM; Holt, RD, Patch dynamics. Springer-Verlag, New York, New York, USA. pp. 277-304

Fire, climate change, and forest processes during the past 2000 years, 0, 1993
Clark, JS, Elk Lake, Minnesota: evidence for rapid climate change in the north-central United States. 276 pp. 295-308

SENSITIVITY OF UNMANAGED ECOSYSTEMS TO GLOBAL CHANGE, 0, 1993
CLARK, JS; REID, CD, ASSESSING SURPRISES AND NONLINEARITIES IN GREENHOUSE WARMING. pp. 53-89

Fire, climate change, and forest processes during the past 2000 years, 0, 1993
Clark, JS, Special Paper of the Geological Society of America. 276 pp. 295-308

Disturbance, climate change, and forest rehabilitation, 1992
J.S. Clark, (1992) pp. 165-186

Implications of individual plant growth for landscape patterns of age structure, net primary production, and resource availabilities, 1992
J.S. Clark, Populations, Communities, and Ecosystems: an Individual Perspective. (1992) pp. 421-454

Validating model predictions of climate and vegetation change, 1992
J.S. Clark, (1992) pp. 423-440

Ecological impacts and risks associated with forest management, 1992
Morris, L.A., P.B. Bush, and J.S. Clark, (1992) pp. 153-214

Density-independent mortality, density compensation, gap formation, and self-thinning in plant populations, 0, 1992
Clark, J.S., Theoretical Population Biology. 42 vol. (2); pp. 172--198

Ecological impacts and risks associated with forest management, 0, 1992
Morris, LA; Bush, PB; Clark, JS, Advances in modern environmental toxicology.

Relationships among individual plant growth and the dynamics of populations and ecosystems, 0, 1992
Clark, JS, Individual-based models and approaches in ecology. Chapman Hall. pp. 421-454

Density-independent mortality, density compensation, gap formation, and self-thinning in plant populations, 1992
Clark, JS, Theoretical Population Biology. (1992) 42 vol. (2); pp. 172-198

Disturbance Climate Change And Forest Rehabilitation, 0, 1992
Clark, J.S., Wali, MK (Ed.). Ecosystem Rehabilitation: Preamble To Sustainable Development, Vol. 2. Ecosystem Analysis And Synthesis. Viii+ 388P. Spb Academic Publishing Bv: The Hague, Netherlands. Illus. Maps. Paper. Isbn. 90 pp. 165--186

Ecosystem sensitivity to climate change and complex responses, 1991
J.S. Clark, (1991) pp. 65-98

Forest-tree growth rates and probability of gap origin–a comment, 1991
Clark, JS, Ecology. (1991) 72 pp. 1166-1169

Disturbance and population structure on the shifting mosaic landscape, 1991
Clark, JS, Ecology. (1991) 72 vol. (3); pp. 1119-1137

Disturbance and tree life history on the shifting mosaic landscape, 1991
Clark, JS, Ecology. (1991) 72 vol. (3); pp. 1102-1118

Disturbance and population structure on the shifting mosaic landscape, 0, 1991
Clark, J.S., Ecology. pp. 1119--1137

Forest-tree growth rates and probability of gap origin: A comment, 0, 1991
Clark, J.S., Ecology. 72 vol. (3); pp. 1166--1169

Disturbance and population structure on the shifting mosaic landscape, 0, 1991
Clark, J.S., Ecology. pp. 1119--1137

Effects of 20th century climate change and fire suppression on forest production and decomposition in northwestern Minnesota, 1990
Clark, JS, Canadian Journal of Forest Research. (1990) 20 pp. 219-232

Population and evolutionary consequences of being a coastal plant: long-term evidence from the North Atlantic coasts, 1990
Clark, JS, Aquatic Science Reviews. (1990) 2 pp. 509-533

Landscape interactions among nitrogen mineralization, species composition, and long-term fire frequency, 1990
Clark, JS, Biogeochemistry. (1990) 11 vol. (1); pp. 1-22

Integration of ecological levels: individual plant growth, population mortality and ecosystem processes, 1990
Clark, JS, Journal of Ecology. (1990) 78 vol. (2); pp. 275-299

Fire and climate change during the last 750 yr in northwestern Minnesota, 1990
Clark, JS, Ecological Monographs. (1990) 60 vol. (2); pp. 135-159

Twentieth-century climate change, fire suppression, and forest production and decomposition in northwestern Minnesota, 0, 1990
Clark, JS, Canadian Journal of Forest Research. 20 vol. (2); pp. 219-232

Evaluating models of climate and forest vegetation, 0, 1990
Clark, J.S., UCAR/Office for Interdisciplinary Earth Studies Boulder, Colorado 1992. pp. 423

Integration of ecological levels: individual plant growth, population mortality and ecosystem processes, 0, 1990
Clark, J.S., The Journal of Ecology. pp. 275--299

Landscape interactions among nitrogen mineralization, species composition, and long-term fire frequency, 0, 1990
Clark, J.S., Biogeochemistry. 11 vol. (1); pp. 1--22

Fire and climate change during the last 750 yr in northwestern Minnesota, 0, 1990
Clark, J.S., Ecological Monographs. 60 vol. (2); pp. 135--159

Water balance and fire occurrence during the last 160 years in northwestern Minnesota, 1989
Clark, JS, Journal of Ecology. (1989) 77 pp. 989-1004

Clark, J.S. 1989. Forests are for burning, 1989
J.S. Clark, Natural History. (1989) 1 pp. 50-53

Post Glacial fire, vegetation, and cultural history of the northern Alpine forelands, southwest Germany, 1989
Clark, JS; Merkt, J; Müller, H, Journal of Ecology. (1989) 77 pp. 897-925

Ecological disturbance as a renewal process: theory and application to fire history, 1989
Clark, JS, Oikos. (1989) 56 vol. (1); pp. 17-30

Effects of long-term water balances on fire regime, north-western Minnesota, 0, 1989
Clark, JS, Journal of Ecology. 77 vol. (4); pp. 989-1004

The forest is for burning, 0, 1989
Clark, JS, Natural history.

Ecological disturbance as a renewal process: theory and application to fire history, 0, 1989
Clark, J.S., Oikos. pp. 17--30

Post-glacial fire, vegetation, and human history on the northern alpine forelands, south-western Germany, 0, 1989
Clark, JS and Merkt, J. and Muller, H., The Journal of Ecology. pp. 897--925

Particle motion and the theory of charcoal analysis: Source area, transport, deposition, and sampling, 1988
Clark, JS, Quaternary Research. (1988) 30 vol. (1); pp. 67-80

Stratigraphic charcoal analysis on petrographic thin sections: Application to fire history in northwestern Minnesota, 1988
Clark, JS, Quaternary Research. (1988) 30 vol. (1); pp. 81-91

Effect of climate change on fire regimes in northwestern Minnesota, 1988
Clark, JS, Nature. (1988) 334 vol. (6179); pp. 233-235

Effect of climate change on fire regimes in northwestern Minnesota, 0, 1988
Clark, J.S.,

Particle motion and the theory of charcoal analysis: source area, transport, deposition, and sampling, 0, 1988
Clark, J.S., Quaternary Research. 30 vol. (1); pp. 67--80

Stratigraphic charcoal analysis on petrographic thin sections: application to fire history in northwestern Minnesota, 0, 1988
Clark, J.S., Quaternary Research. 30 vol. (1); pp. 81--91

Dating of the organic deposits, 1987
J.S. Clark and Patterson, W.A., (1987)

Dynamism in the barrier-beach vegetation of Great South Beach, New York, 1986
Clark, JS, Ecological Monographs. (1986) 56 pp. 97-126

Late Holocene vegetation and coastal processes at a Long Island tidal marsh, 1986
J.S. Clark, (1986) 74 pp. 561-578

Coastal forest tree populations in a changing environment, southeastern Long Island, New York, 1986
Clark, JS, Ecological Monographs. (1986) 56 pp. 259-277

Vegetation and land-use history of the William Floyd Estate, Fire Island National Seashore, New York, 1986
J.S. Clark, (1986)

Late- Holocene vegetation and coastal processes at a Long Island tidal marsh., 0, 1986
Clark, JS, Journal of Ecology. 74 vol. (2); pp. 561-578

Dynamism in the barrier-beach vegetation of Great South Beach, New York, 0, 1986
Clark, JS, Ecological monographs. pp. 98-126

Pollen stratigraphic correlation and dating of barrier-beach peat sections, 0, 1986
Clark, JS and Overpeck, JT and Webb, T. and Patterson, WA, Review of palaeobotany and palynology. 47 vol. (1); pp. 145--168

Coastal forest tree populations in a changing environment, southeastern Long Island, New York, 0, 1986
Clark, J.S., Ecological Monographs. pp. 259--277

Pollen stratigraphic correlation and dating of barrier-beach peat sections, 1986
Clark, JS; Overpeck, JT; III, TW; III, WAP, Review of Palaeobotany and Palynology. (1986) 47 vol. (1-2); pp. 145-168

The development of a tidal marsh: upland and oceanic influences, 0, 1985
Clark, J.S. and Patterson III, W.A., Ecological Monographs. pp. 189--217

The development of a tidal marsh: upland and oceanic influences, 1985
Clark, JS; Patterson, WA, Ecological Monographs. (1985) 55 pp. 189-217

Chronologies for recent sediments in coastal environments, 1984
J.S. Clark, (1984) 12 pp. 76-81

Pollen, 210Pb, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment, 1984
Clark, JS; Patterson, WA, Journal of Sedimentary Petrology. (1984) 54 pp. 1249-1263

Pollen, Pb-210, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment ( Long Island)., 0, 1984
Clark, JS; III, WAP, Journal of Sedimentary Petrology. 54 vol. (4); pp. 1251-1265

Pollen, Pb-210, and opaque spherules: an integrated approach to dating and sedimentation in the intertidal environment, 0, 1984
Clark, J.S. and Patterson III, W.A., Journal of Sedimentary Research. 54 vol. (4);

Book Chapters:

Models for demography of plant populations in Handbook of Bayesian Analysis, Oxford University Press., 0, 2010
Clark, J.S., D. Bell, M. Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. M. McMahon, C.J.E. Metcalf, E. Moran, L. Pangle, and M. Wolosin.

A Predictive Framework to Understand Forest Responses to Global Change in Year in Ecology and Conservation Biology, 0, 2009
McMahon, S. M., M. C. Dietze, M. H. Hersh, E. V. Moran, and J. S. Clark

Models for demography of plant populations in Handbook of Bayesian Analysis, 0, 2009
Clark, J.S., D. Bell, M. Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. McMahon, J. Metcalf, E. Moran, L. Pangle, and M. Wolosin

Models for ecological data: an introduction in , 0, 2007
Clark, J.S.

Statistical computation for environmental sciences in R: lab manual for models for ecological data in , 0, 2007
Clark, J.S.

Hierarchical Modelling for the Environmental Sciences in Oxford University Press, Oxford, England., 2006
Clark. J.S. and A. E. Gelfand (eds)

Hierarchical modelling for the environmental sciences: statistical methods and applications in , 0, 2006
Clark, J.S. and Gelfand, A.

Models for Ecological Data in , under contract
J.S. Clark

Ecological data models with R in , under contract
J.S. Clark

Applications of Computational Statistics in the Environmental Sciences: Hierarchical Bayes and MCMC Methods in , under contract
Clark, J.S. and A. Gelfand (eds.)

Spatial variability in fire regimes: its effects on recent and past vegetation in , 0, 2002
Clark, J.S. and Gill, A.M. and Kershaw, A.P.

Sediment Records of Biomass Burning and Global Change in , 1997
Clark, J.S., B.J. Stocks, H. Cachier, and J.G. Goldammer (eds.)

Sediment records of biomass burning and global change in , 0, 1997
Clark, J.S.

Papers Submitted

Elevated CO2 and tree fecundity: the role of tree size, interannual variability, and population heterogeneity in in review
LaDeau, S.L. and J.S. Clark

Predicting biodiversity change: Outside the climate envelope, beyond the species-area curve in in review
Ibáñez, I., J. S. Clark, M. C. Dietze, K. Feeley, M. Hersh, S. LaDeau, A. McBride, N. E. Welch, and M. S. Wolosin

Long-term CO2 enrichment of an intact forest ecosystem: implications for temperate forest regeneration and succession in in review
Mohan, J.E., J. S. Clark, and W. H. Schlesinger

Population inference from messy data: Structured, variable, and uncertain demographic change in 2003
Clark, J.S., G. Ferraz, and N. Oguge

Data to ecosystem prediction: complexity, variability, and uncertainty with hierarchical Bayes in 0, 2003
Clark, J.S

Do seed and seedling predation contribute to the coexistence of three co-occuring tree species in 0, 2003
Beckage, B. and J.S. Clark

Seed banking in temperate forests: Implications for recruitment limitation in 0, 2003
Hille Ris Lambers, J., J.S. Clark., and M. Lavine

Awards

  • 2012 Fellow of the Ecological Society of America, Ecological Society of America

  • 2011 ISI Highly Cited Researcher

  • 2011 ISI Highly Cited Researcher, The Institute for Scientific Information

  • 2009 awards

  • 2005 Fellows, American Academy of Arts and Sciences

  • 1994 George Mercer Award, Ecological Society of America