Francois M. Lutzoni

Professor in the Department of Biology

Office: 
357 Bio Sci Bldg, Durham, NC 27708
Campus Box: 
90338
Phone: 
(919) 660-7261
Fax: 
660-7293

Lab Site: http://lutzonilab.org

Education

  • Ph.D. 1995, Duke University

  • M. Sc. 1990, University of Ottawa

  • M.S. 1990, Ottawa University

  • B. Sc. 1987, Université Laval

  • B.S. 1987, Grinnel College and University of Laval

Papers Published

Biological nitrogen fixation by alternative nitrogenases in boreal cyanolichens: importance of molybdenum availability and implications for current biological nitrogen fixation estimates., 1, 2017
Darnajoux, R; Zhang, X; McRose, DL; Miadlikowska, J; Lutzoni, F; Kraepiel, AML; Bellenger, J-P, New Phytologist. 213 vol. (2); pp. 680-689

Photobiont associations in co-occurring umbilicate lichens with contrasting modes of reproduction in coastal Norway, 9, 2016
HESTMARK, G; LUTZONI, F; MIADLIKOWSKA, J, Lichenologist. 48 vol. (05); pp. 545-557

Wood staining fungi revealed taxonomic novelties in Pezizomycotina: New order Superstratomycetales and new species Cyanodermella oleoligni, 9, 2016
van Nieuwenhuijzen, EJ; Miadlikowska, JM; Houbraken, JAMP; Adan, OCG; Lutzoni, FM; Samson, RA, Studies in mycology. 85 pp. 107-124

Erratum to: Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale, 6, 2016
Chagnon, P-L; U’Ren, JM; Miadlikowska, J; Lutzoni, F; Arnold, AE, Oecologia. 181 vol. (2); pp. 633-633

Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota), 5, 2016
U’Ren, JM; Miadlikowska, J; Zimmerman, NB; Lutzoni, F; Stajich, JE; Arnold, AE, Molecular Phylogenetics and Evolution. 98 pp. 210-232

The adaptive radiation of lichen-forming Teloschistaceae is associated with sunscreening pigments and a bark-to-rock substrate shift., 9, 2015
Gaya, E; Fernández-Brime, S; Vargas, R; Lachlan, RF; Gueidan, C; Ramírez-Mejía, M; Lutzoni, F, Proceedings of the National Academy of Sciences of USA. 112 vol. (37); pp. 11600-11605

Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order - Phaeomoniellales., 4, 2015
Chen, K-H; Miadlikowska, J; Molnár, K; Arnold, AE; U'Ren, JM; Gaya, E; Gueidan, C; Lutzoni, F, Molecular Phylogenetics and Evolution. 85 pp. 117-130

Determination of elemental baseline using peltigeralean lichens from Northeastern Canada (Québec): Initial data collection for long term monitoring of the impact of global climate change on boreal and subarctic area in Canada., 11, 2015
Darnajoux, R; Lutzoni, F; Miadlikowska, J; Bellenger, J-P, Science of the Total Environment. 533 pp. 1-7

A comparison of the community diversity of foliar fungal endophytes between seedling and adult loblolly pines (Pinus taeda), 10, 2015
Oono, R; Lefèvre, E; Simha, A; Lutzoni, F, Fungal Biology. 119 vol. (10); pp. 917-928

Genetic variation in horizontally transmitted fungal endophytes of pine needles reveals population structure in cryptic species., 8, 2014
Oono, R; Lutzoni, F; Arnold, AE; Kaye, L; U'Ren, JM; May, G; Carbone, I, American journal of botany. 101 vol. (8); pp. 1362-1374

Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquatic Peltigera species (lichen-forming Ascomycota, Lecanoromycetes)., 7, 2014
Miadlikowska, J; Richardson, D; Magain, N; Ball, B; Anderson, F; Cameron, R; Lendemer, J; Truong, C; Lutzoni, F, American journal of botany. 101 vol. (7); pp. 1141-1156

A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families., 10, 2014
Miadlikowska, J; Kauff, F; Högnabba, F; Oliver, JC; Molnár, K; Fraker, E; Gaya, E; Hafellner, J; Hofstetter, V; Gueidan, C; Otálora, MAG; Hodkinson, B; Kukwa, M; Lücking, R; Björk, C; Sipman, HJM; Burgaz, AR; Thell, A; Passo, A; Myllys, L; Goward, T; Fernández-Brime, S; Hestmark, G; Lendemer, J; Lumbsch, HT; Schmull, M; Schoch, CL; Sérusiaux, E; Maddison, DR; Arnold, AE; Lutzoni, F; Stenroos, S, Molecular Phylogenetics and Evolution. 79 pp. 132-168

Assessing population structure and host specialization in lichenized cyanobacteria., 2013
O'Brien, HE; Miadlikowska, J; Lutzoni, F, New Phytologist. (2013) 198 vol. (2); pp. 557-566

Twenty-five aposymbiotic cultures of lichenizing fungi available for experimental studies on symbiotic systems, 2013
McDonald, TR; Gaya, E; Lutzoni, F, Symbiosis. (2013) 59 vol. (3); pp. 165-171

High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporters/ammonia permeases gene family, 2013
McDonald, TR; Dietrich, FS; Lutzoni, F, BMC Genomics. (2013) 14 pp. 225

Phylogenetic study of Diploschistes (lichen-forming Ascomycota: Ostropales: Graphidaceae), based on morphological, chemical, and molecular data, 2013
Fernández-Brime, S; Llimona, X; Lutzoni, F; Gaya, E, Taxon. (2013) 62 vol. (2); pp. 267-280

TRENTEPOHLIALES (ULVOPHYCEAE, CHLOROPHYTA) FROM COASTAL SOUTH CAROLINA, 8, 2012
Green, MS; Ball, B; Lutzoni, F; Zi-Min, H; Lopez-Bautista, JM, Journal of Phycology. 48 pp. S15-S15

Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota)., 2012
Gaya, E; Högnabba, F; Holguin, A; Molnar, K; Fernández-Brime, S; Stenroos, S; Arup, U; Søchting, U; Van den Boom, P; Lücking, R; Sipman, HJM; Lutzoni, F, Molecular Phylogenetics and Evolution. (2012) 63 vol. (2); pp. 374-387

Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification., 2012
McDonald, TR; Dietrich, FS; Lutzoni, F, Molecular Biology and Evolution. (2012) 29 vol. (1); pp. 51-60

MOLECULAR PHYLOGENY OF HETEROPLACIDIUM, PLACIDIUM, AND RELATED CATAPYRENIOID GENERA (VERRUCARIACEAE, LICHEN-FORMING ASCOMYCOTA), 2012
Prieto, M; Martinez, I; Aragon, G; Gueidan, C; Lutzoni, F, American journal of botany. (2012) 99 vol. (1); pp. 23-35

Host and geographic structure of endophytic and endolichenic fungi at a continental scale, 2012
U'Ren, JM; Lutzoni, F; Miadlikowska, J; Laetsch, AD; Arnold, AE, American journal of botany. (2012) 99 vol. (5); pp. 898-914

Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes, 0, 2012
Gazis, R; Miadlikowska, J; Lutzoni, F; Arnold, AE; Chaverri, P, Molecular Phylogenetics and Evolution. 65 vol. (1); pp. 294-304

Are widespread morphospecies from the Lecanora dispersa group (lichen-forming Ascomycota) monophyletic?, 2012
Liwa, L; Miadlikowska, J; Redelings, BD; Molnar, K; Lutzoni, F, Bryologist. (2012) 115 vol. (2); pp. 265-277

Frequent circumarctic and rare transequatorial dispersals in the lichenised agaric genus Lichenomphalia (Hygrophoraceae, Basidiomycota), 2012
Geml, J; Kauff, F; Brochmann, C; Lutzoni, F; Laursen, GA; Redhead, SA; Taylor, DL, Fungal Biology. (2012) 116 vol. (3); pp. 388-400

Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome, 2012
Hodkinson, BP; Gottel, NR; Schadt, CW; Lutzoni, F, Environmental Microbiology. (2012) 14 vol. (1); pp. 147-161

Fungal and algal gene expression in early developmental stages of lichen-symbiosis., 2011
Joneson, S; Armaleo, D; Lutzoni, F, Mycologia. (2011) 103 vol. (2); pp. 291-306

Expansion of the stictidaceae by the addition of the saxicolous lichen-forming genus Ingvariella, 2011
Fernández-Brime, S; Llimona, X; Molnar, K; Stenroos, S; Högnabba, F; Björk, C; Lutzoni, F; Gaya, E, Mycologia. (2011) 103 vol. (4); pp. 755-763

Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota), 2011
Schmull, M; Miadlikowska, J; Pelzer, M; tter, ES-W; Hofstetter, V; Fraker, E; Hodkinson, BP; Reeb, V; Kukwa, M; Lumbsch, HT; Kauff, F; Lutzoni, F, Mycologia. (2011) 103 vol. (5); pp. 983-1003

Revisiting photobiont diversity in the lichen family Verrucariaceae (Ascomycota), 0, 2011
Thues, H; Muggia, L; Perez-Ortega, S; Favero-Longo, SE; Joneson, S; O'Brien, H; Nelsen, MP; Duque-Thues, R; Grube, M; Friedl, T; Brodie, J; Andrew, CJ; Luecking, R; Lutzoni, F; Gueidan, C, European Journal of Phycology. 46 vol. (4); pp. 399-415

Single origin and subsequent diversification of central Andean endemic Umbilicaria species, 2011
Hestmark, G; Miadlikowska, J; Kauff, F; Fraker, E; Molnar, K; Lutzoni, F, Mycologia. (2011) 103 vol. (1); pp. 45-56

Align or not to align? Resolving species complexes within the Caloplaca saxicola group as a case study, 2011
Gaya, E; Redelings, BD; Navarro-Rosinés, P; Llimona, X; Cáceres, MD; Lutzoni, F, Mycologia. (2011) 103 vol. (2); pp. 361-378

Hypogymnia phylogeny, including Cavernularia, reveals biogeographic structure, 2011
Miadlikowska, J; Schoch, CL; Kageyama, SA; Molnar, K; Lutzoni, F; McCune, B, Bryologist. (2011) 114 vol. (2); pp. 392-400

Phylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence, 2010
Crespo, A; Kauff, F; Divakar, PK; del Prado, R; Perez-Ortega, S; Amo de Paz, G; Ferencova, Z; Blanco, O; Roca-Valiente, B; Nunez-Zapata, J; Cubas, P; Argueello, A; Elix, JA; Esslinger, TL; Hawksworth, DL; Millanes, A; Carmen Molina, M; Wedin, M; Ahti, T; Aptroot, A; Barreno, E; Bungartz, F; Calvelo, S; Candan, M; Cole, M; Ertz, D; Goffinet, B; Lindblom, L; Luecking, R; Lutzoni, F; Mattsson, J-E; Ines Messuti, M; Miadlikowska, J; Piercey-Normore, M; Rico, VJ; Sipman, HJM; Schmitt, I et al., Taxon. (2010) 59 vol. (6); pp. 1735-1753

Disentangling the Collema-Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota), 2010
Otálora, MAG; Aragón, G; Molina, MC; Martínez, I; Lutzoni, F, Mycologia. (2010) 102 vol. (2); pp. 279-290

Phylogenetic study of Catapyrenium s. str. (Verrucariaceae, lichen-forming Ascomycota) and related genus Placidiopsis, 2010
Prieto, M; Martínez, I; Aragón, G; Otálora, MAG; Lutzoni, F, Mycologia. (2010) 102 vol. (2); pp. 291-304

Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes), 2010
Otálora, MAG; Martínez, I; O'Brien, H; Molina, MC; Aragón, G; Lutzoni, F, Molecular Phylogenetics and Evolution. (2010) 56 vol. (3); pp. 1089-1095

Community Analysis Reveals Close Affinities Between Endophytic and Endolichenic Fungi in Mosses and Lichens, 2010
U'Ren, JM; Lutzoni, F; Miadlikowska, J; Arnold, AE, Microbial Ecology. (2010) 60 vol. (2); pp. 340-353

Assessing reproductive isolation in highly diverse communities of the lichen-forming fungal genus peltigera., 2009
O'Brien, HE; Miadlikowska, J; Lutzoni, F, Evolution. (2009) 63 vol. (8); pp. 2076-2086

Lichens., 2009
Lutzoni, F; Miadlikowska, J, Current Biology. (2009) 19 vol. (13); pp. R502-R503

A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification?, 2009
Arnold, AE; Miadlikowska, J; Higgins, KL; Sarvate, SD; Gugger, P; Way, A; Hofstetter, V; Kauff, F; Lutzoni, F, Systematic Biology (OUP). (2009) 58 vol. (3); pp. 283-297

A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales, 2009
Hodkinson, BP; Lutzoni, F, Symbiosis. (2009) 49 vol. (2); pp. 163-180

Revisiting compatibility and thigmotropism in the lichen symbiosis, 2009
Joneson, S; Lutzoni, F, Symbiosis. (2009) 47 vol. (2); pp. 109-115

Compatibility and thigmotropism in the lichen symbiosis: A reappraisal, 0, 2009
Joneson, S; Lutzoni, F, Symbiosis. 47 vol. (2); pp. 109-115

Phylogeny of rock-inhabiting fungi related to Dothideomycetes, 2009
Ruibal, C; Gueidan, C; Selbmann, L; Gorbushina, AA; Crous, PW; Groenewald, JZ; Muggia, L; Grube, M; Isola, D; Schoch, CL; Staley, JT; Lutzoni, F; Hoog, GSD, Studies in mycology. (2009) 64 pp. 123-133

The search for the fungal tree of life, 0, 2009
McLaughlin, DJ; Hibbett, DS; Lutzoni, F; Spatafora, JW; Vilgalys, R, Trends in Microbiology. 17 vol. (11); pp. 488-497

Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: Recent progress and remaining challenges, 2009
Gueidan, C; Savić, S; Thüs, H; Roux, C; Keller, C; Tibell, L; Prieto, M; Heiomarsson, S; Breuss, O; Orange, A; Fröberg, L; Wynns, AA; Navarro-Rosinés, P; Krzewicka, B; Pykälä, J; Grube, M; Lutzoni, F, Taxon. (2009) 58 vol. (1); pp. 184-208

The ascomycota tree of life: A phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits, 2009
Schoch, CL; Sung, G-H; López-Giráldez, F; Townsend, JP; Miadlikowska, J; Hofstetter, V; Robbertse, B; Matheny, PB; Kauff, F; Wang, Z; Gueidan, C; Andrie, RM; Trippe, K; Ciufetti, LM; Wynns, A; Fraker, E; Hodkinson, BP; Bonito, G; Groenewald, JZ; Arzanlou, M; Hoog, GSD; Crous, PW; Hewitt, D; Pfister, DH; Peterson, K; Gryzenhout, M; Wingfield, MJ; Aptroot, A; Suh, S-O; Blackwell, M; Hillis, DM; Griffith, GW; Castlebury, LA; Rossman, AY; Lumbsch, HT; Lücking, R; Büdel, B; Rauhut, A; Diederich, P et al., Systematic Biology (OUP). (2009) 58 vol. (2); pp. 224-239

Towards a new classification of the Arthoniales (Ascomycota) based on a three-gene phylogeny focussing on the genus Opegrapha, 2009
Ertz, D; Miadlikowska, J; Lutzoni, F; Dessein, S; Raspé, O; Vigneron, N; Hofstetter, V; Diederich, P, Mycological Research. (2009) 113 vol. (1); pp. 141-152

Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)., 5, 2008
Gaya, E; Navarro-Rosinés, P; Llimona, X; Hladun, N; Lutzoni, F, Mycological Research. 112 vol. (Pt 5); pp. 528-546

A rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages., 0, 2008
Gueidan, C; Villaseñor, CR; de Hoog, GS; Gorbushina, AA; Untereiner, WA; Lutzoni, F, Studies in mycology. 61 pp. 111-119

An extremotolerant rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages, 2008
Gueidan, C; Ruibal Villasenor, C; de Hoog, S; Gorbushina, A; Untereiner, WA; Lutzoni, F, Studies in Mycology. (2008) 61 pp. 111-119

Molecular phylogeny and systematics of Polyblastia (Verrucariaceae, Eurotiomycetes) and allied genera, 0, 2008
Savić, S; Tibell, L; Gueidan, C; Lutzoni, F, Mycological Research. 112 vol. (11); pp. 1307-1318

Phylogenetic relationships and taxonomy of the Leptogium lichenoides group (Collemataceae, Ascomycota) in Europe, 0, 2008
Otálora, MAG; Martínez, I; Molina, MC; Aragón, G; Lutzoni, F, Taxon. 57 vol. (3); pp. 907-921

Dermatocarpon (Verrucariaceae) in the Ozark Highlands, North America, 2008
Amtoft, A; Lutzoni, F; Miadlikowska, J, Bryologist. (2008) 111 vol. (1); pp. 1-40

Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota)., 2007
Hofstetter, V; Miadlikowska, J; Kauff, F; Lutzoni, F, Molecular Phylogenetics and Evolution. (2007) 44 vol. (1); pp. 412-426

WASABI: an automated sequence processing system for multigene phylogenies., 2007
Kauff, F; Cox, CJ; Lutzoni, F, Systematic Biology (OUP). (2007) 56 vol. (3); pp. 523-531

DNA sequence characterization and molecular evolution of MAT1 and MAT2 mating-type loci of the self-compatible ascomycete mold Neosartorya fischeri., 2007
Rydholm, C; Dyer, PS; Lutzoni, F, Eukaryotic cell. (2007) 6 vol. (5); pp. 868-874

Evolution of Pleopsidium (lichenized Ascomycota) S943 group I introns and the phylogeography of an intron-encoded putative homing endonuclease., 2007
Reeb, V; Haugen, P; Bhattacharya, D; Lutzoni, F, Journal of Molecular Evolution. (2007) 64 vol. (3); pp. 285-298

Diversity and host range of foliar fungal endophytes: are tropical leaves biodiversity hotspots?, 2007
Arnold, AE; Lutzoni, F, Ecology. (2007) 88 vol. (3); pp. 541-549

Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR., 2007
Arnold, AE; Henk, DA; Eells, RL; Lutzoni, F; Vilgalys, R, Mycologia. (2007) 99 vol. (2); pp. 185-206

Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages., 2007
Higgins, KL; Arnold, AE; Miadlikowska, J; Sarvate, SD; Lutzoni, F, Molecular Phylogenetics and Evolution. (2007) 42 vol. (2); pp. 543-555

Using a multigene phylogenetic analysis to assess generic delineation and character evolution in Verrucariaceae (Verrucariales, Ascomycota)., 10, 2007
Gueidan, C; Roux, C; Lutzoni, F, Mycological Research. 111 vol. (Pt 10); pp. 1145-1168

A higher-level phylogenetic classification of the Fungi, 2007
Hibbett, DS; Binder, M; Bischoff, JF; Blackwell, M; Cannon, PF; Eriksson, OE; Huhndorf, S; James, T; Kirk, PM; Lücking, R; Lumbsch, HT; Lutzoni, F; Matheny, PB; McLaughlin, DJ; Powell, MJ; Redhead, S; Schoch, CL; Spatafora, JW; Stalpers, JA; Vilgalys, R; Aime, MC; Aptroot, A; Bauer, R; Begerow, D; Benny, GL; Castlebury, LA; Crous, PW; Dai, Y-C; Gams, W; Geiser, DM; Griffith, GW; Gueidan, C; Hawksworth, DL; Hestmark, G; Hosaka, K; Humber, RA; Hyde, KD; Ironside, JE; Kõljalg, U; Kurtzman, CP et al., Mycological Research. (2007) 111 vol. (5); pp. 509-547

Using a multigene analysis to assess generic delineation and character evolution in the Verrucariaceae (Verrucariales, Ascomycota)., 2007
Gueidan, C; Roux, C; Lutzoni, F, Mycological Research. (2007) 110 pp. 1147-1170

Recognizing dinoflagellate species using its rDNA sequences, 2007
Litaker, RW; Vandersea, MW; Kibler, SR; Reece, KS; Stokes, NA; Lutzoni, FM; Yonish, BA; West, MA; Black, MND; Tester, PA, Journal of Phycology. (2007) 43 vol. (2); pp. 344-355

From the leaf to the landscape: Endophyte diversity and interactions at small and large spatial scales, 6, 2006
Arnold, AE; Lutzoni, F, Phytopathology. 96 vol. (6); pp. S136-S137

Low genetic variation and no detectable population structure in aspergillus fumigatus compared to closely related Neosartorya species., 2006
Rydholm, C; Szakacs, G; Lutzoni, F, Eukaryotic cell. (2006) 5 vol. (4); pp. 650-657

New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes., 11, 2006
Miadlikowska, J; Kauff, F; Hofstetter, V; Fraker, E; Grube, M; Hafellner, J; Reeb, V; Hodkinson, BP; Kukwa, M; Lücking, R; Hestmark, G; Otalora, MG; Rauhut, A; Büdel, B; Scheidegger, C; Timdal, E; Stenroos, S; Brodo, I; Perlmutter, GB; Ertz, D; Diederich, P; Lendemer, JC; May, P; Schoch, CL; Arnold, AE; Gueidan, C; Tripp, E; Yahr, R; Robertson, C; Lutzoni, F, Mycologia. 98 vol. (6); pp. 1088-1103

Reconstructing the early evolution of Fungi using a six-gene phylogeny., 2006
James, TY; Kauff, F; Schoch, CL; Matheny, PB; Hofstetter, V; Cox, CJ; Celio, G; Gueidan, C; Fraker, E; Miadlikowska, J; Lumbsch, HT; Rauhut, A; Reeb, V; Arnold, AE; Amtoft, A; Stajich, JE; Hosaka, K; Sung, G-H; Johnson, D; O'Rourke, B; Crockett, M; Binder, M; Curtis, JM; Slot, JC; Wang, Z; Wilson, AW; Schüssler, A; Longcore, JE; O'Donnell, K; Mozley-Standridge, S; Porter, D; Letcher, PM; Powell, MJ; Taylor, JW; White, MM; Griffith, GW; Davies, DR; Humber, RA; Morton, JB; Sugiyama, J et al., Nature. (2006) 443 vol. (7113); pp. 818-822

A five-gene phylogeny of Pezizomycotina, 2006
Spatafora, JW; Sung, GH; Johnson, D; O’Rourke, B; Serdani, M; Spotts, R; Lutzoni, F; Hofstetter, V; Aptroot, A; Roux, C; Miller, A; Geiser, D; Hafellner, J; Hestmark, G; Arnold, AE; Büdel, B; Rauhut, A; Untereiner, WA; Cole, MS; Scheidegger, C; Schultz, M; Sipman, H; Schoch, C, Mycologia. (2006) 98 vol. (6); pp. 1020-1030

Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae, 2006
Geiser, DM; Gueidan Miadlikowska, J; Kauff, F; Hofstetter, V; Fraker, E; Schoch, CL; Tibell, L; Untereiner, WA; Aptroot, A; Lutzoni, F, Mycologia. (2006) 98 vol. (6); pp. 1055-1066

New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes, 2006
Miadlikowska, J; Kauff, F; Hofstetter, V; Fraker, E; Grube, M; Hafellner, J; Reeb, V; Hodkinson, BP; Kukwa, M; Lücking, R; Hestmark, G; Otalora, MAG; Rauhut, A; Büdel, B; Scheidegger, C; Timdal, I; Stenroos, S; Brodo, I; Perlmutter, G; Ertz, D; Diederich, P; Lendemer, JC; Tripp, E; Yahr, R; May, P; Gueidan, C; Arnold, AE; Robertson, C; Lutzoni, F, Mycologia. (2006) 98 vol. (6); pp. 1090-1103

Systematics of the genus Chaetosphaeria and its allied genera: Morphological and phylogenetic diversity in north temperate and neotropical taxa, 2006
Fernández, FA; Miller, AN; Huhndorf, SM; Lutzoni, FM; Zoller, S, Mycologia. (2006) 98 vol. (1); pp. 121-130

A five-gene phylogeny of Pezizomycotina, 0, 2006
Spatafora, JW; Sung, G-H; Johnson, D; Hesse, C; O'Rourke, B; Serdani, M; Spotts, R; Lutzoni, F; Hofstetter, V; Miadlikowska, J; Reeb, V; Gueidan, C; Fraker, E; Lumbsch, T; Lücking, R; Schmitt, I; Hosaka, K; Aptroot, A; Roux, C; Miller, AN; Geiser, DM; Hafellner, J; Hestmark, G; Arnold, AE; Büdel, B; Rauhut, A; Hewitt, D; Untereiner, WA; Cole, MS; Scheidegger, C; Schultz, M; Sipman, H; Schoch, CL, Mycologia. 98 vol. (6); pp. 1018-1028

Eurotiomycetes: Eurotiomycetidae and chaetothyriomycetidae, 0, 2006
Geiser, DM; Gueidan, C; Miadlikowska, J; Lutzoni, F; Kauff, F; Hofstetter, V; Fraker, E; Schoch, CL; Tibell, L; Untereiner, WA; Aptroot, A, Mycologia. 98 vol. (6); pp. 1053-1064

Erratum: (American Journal of Botany (October 2004) 91:10 (1450)), 0, 2005
Lutzoni, , American journal of botany. 92 vol. (1); pp. i

Assessing host specialization in symbiotic cyanobacteria associated with four closely related species of the lichen fungus Peltigera, 0, 2005
O'Brien, HE; Miadlikowska, J; Lutzoni, F, European Journal of Phycology. 40 vol. (4); pp. 363-378

Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus, 0, 2005
Paoletti, M; Rydholm, C; Schwier, EU; Anderson, MJ; Szakacs, G; Lutzoni, F; Debeaupuis, J-P; Latgé, J-P; Denning, DW; Dyer, PS, Current Biology. 15 vol. (13); pp. 1242-1248

Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA, 0, 2005
Bhattacharya, D; Reeb, V; Simon, DM; Lutzoni, F, BMC Evolutionary Biology. 5 vol. (68);

Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory., 2004
Reeb, V; Lutzoni, F; Roux, C, Molecular Phylogenetics and Evolution. (2004) 32 vol. (3); pp. 1036-1060

Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits., 3, 2004
Miadlikowska, J; Lutzoni, F, American journal of botany. 91 vol. (3); pp. 449-464

Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits., 10, 2004
Lutzoni, F; Kauff, F; Cox, CJ; McLaughlin, D; Celio, G; Dentinger, B; Padamsee, M; Hibbett, D; James, TY; Baloch, E; Grube, M; Reeb, V; Hofstetter, V; Schoch, C; Arnold, AE; Miadlikowska, J; Spatafora, J; Johnson, D; Hambleton, S; Crockett, M; Shoemaker, R; Sung, G-H; Lücking, R; Lumbsch, T; O'Donnell, K; Binder, M; Diederich, P; Ertz, D; Gueidan, C; Hansen, K; Harris, RC; Hosaka, K; Lim, Y-W; Matheny, B; Nishida, H; Pfister, D; Rogers, J; Rossman, A; Schmitt, I; Sipman, H; Stone, J et al., American journal of botany. 91 vol. (10); pp. 1446-1480

The Evolution of Homing Endonuclease Genes and Group I Introns in Nuclear rDNA, 0, 2004
Haugen, P; Reeb, V; Lutzoni, F; Bhattacharya, D, Molecular Biology and Evolution. 21 vol. (1); pp. 129-140

The evolution of homing endonuclease genes and group I introns in nuclear rDNA., 0, 2004
Haugen, P; Reeb, V; Lutzoni, F; Bhattacharya, D, Molecular Biology and Evolution. 21 vol. (1); pp. 105-116

Slow algae, fast fungi: exceptionally high nucleotide substitution rate differences between lichenized fungi Omphalina and their symbiotic green algae Coccomyxa., 12, 2003
Zoller, S; Lutzoni, F, Molecular Phylogenetics and Evolution. 29 vol. (3); pp. 629-640

New approach to an old problem: Incorporating signal from gap-rich regions of ITS and rDNA large subunit into phylogenetic analyses to resolve the Peltigera canina species complex., 11, 2003
Miadlikowska, J; Lutzoni, F; Goward, T; Zoller, S; Posada, D, Mycologia. 95 vol. (6); pp. 1181-1203

Molecular phylogenetic study at the generic boundary between the lichen-forming fungi Caloplaca and Xanthoria (Ascomycota, Teloschistaceae), 0, 2003
Søchting, U; Lutzoni, F, Mycological Research. 107 vol. (11); pp. 1266-1276

Phylogenetic study of Fulgensia and allied Caloplaca and Xanthoria species (Teloschistaceae, lichen-forming ascomycota), 0, 2003
Gaya, E; Lutzoni, F; Zoller, S; Navarro-Rosinés, P, American Journal of Botany. 90 vol. (7); pp. 1095-1103

The lichen genus Sticta in the Great Smoky Mountains: A phylogenetic study of morphological, chemical, and molecular data, 0, 2003
McDonald, T; Miadlikowska, J; Lutzoni, F, Bryologist. 106 vol. (1); pp. 61-79

Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence, 0, 2003
Alfaro, ME; Zoller, S; Lutzoni, F, Molecular Biology and Evolution. 20 vol. (2); pp. 255-266

Erratum: Evolutionary relationships among mucoralean fungi (zygomycota): Evidence for family polyphyly on a large scale (Mycologia (2001) 93:2), 0, 2002
O'Donnell, K; Lutzoni, FM; Ward, TJ; Benny, GL, Mycologia. 93 vol. (4); pp. 814-

Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): Among and within order relationships based on nuclear ribosomal RNA small and large subunits, 0, 2002
Kauff, F; Lutzoni, F, Molecular Phylogenetics and Evolution. 25 vol. (1); pp. 138-156

The utility of the incongruence length difference test, 0, 2002
Barker, FK; Lutzoni, FM, Systematic Biology. 51 vol. (4); pp. 625-637

Phylogeny of agarics: Partial systematics solutions for bryophilous omphalinoid agarics outside of the Agaricales (euagarics), 0, 2002
Redhead, SA; Moncalvo, JM; Vilgalys, R; Lutzoni, F, Mycotaxon. 82 pp. 151-168

Pseudocyphellaria perpetua, a new lichen from western North America, 0, 2002
Miadlikowska, J; McCune, B; Lutzoni, F, Bryologist. 105 vol. (1); pp. 1-10

Phylogeny of agarics: Partial systematics solutions for core Omphalinoid genera in the Agaricales (Euagarics), 0, 2002
Redhead, SA; Lutzoni, F; Moncalvo, J-M; Vilgalys, R, Mycotaxon. 83 pp. 19-57

Comparative performance of the bootstrap and Bayesian MCMC sampling in assessing phylogenetic confidence: a simulation study, 12, 2001
Alfaro, ME; Zoller, S; Lutzoni, F, Integrative and Comparative Biology. 41 vol. (6); pp. 1379-1379

Evolutionary relationships among mucuralean fungi (Zygomycota): Evidence for family polyphyly on a large scale (vol 93, pg 286, 2001), 0, 2001
O'Donnell, K; Lutzoni, FM; Ward, TJ; Benny, GL, Mycologia. 93 vol. (4); pp. 814-814

Major fungal lineages are derived from lichen symbiotic ancestors, 0, 2001
Lutzoni, F; Pagel, M; Reeb, V, Nature. 411 vol. (6840); pp. 937-940

Evolutionary relationships among mucoralean fungi (Zygomycota): Evidence for family polyphyly on a large scale, 0, 2001
O'Donnell, K; Lutzoni, FM; Ward, TJ; Benny, GL, Mycologia. 93 vol. (2); pp. 286-296

Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences., 6, 2000
Moncalvo, JM; Lutzoni, FM; Rehner, SA; Johnson, J; Vilgalys, R, Systematic Biology (OUP). 49 vol. (2); pp. 278-305

Widespread occurrence of spliceosomal introns in the rDNA genes of ascomycetes, 0, 2000
Bhattacharya, D; Lutzoni, F; Reeb, V; Simon, D; Nason, J; Fernandez, F, Molecular Biology and Evolution. 17 vol. (12); pp. 1971-1984

Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology, 0, 2000
Lutzoni, F; Wagner, P; Reeb, V; Zoller, S, Systematic Biology. 49 vol. (4); pp. 628-651

Phylogenetic revision of the genus Peltigera (lichen-forming Ascomycota) based on morphological, chemical, and large subunit nuclear ribosomal DNA data, 0, 2000
Miadlikowska, J; Lutzoni, F, International Journal of Plant Sciences. 161 vol. (6); pp. 925-958

Phylogenetic and biogeographic relationships of Eastern Asian and Eastern North American disjunct Suillus species (fungi) as inferred from nuclear ribosomal RNA its sequences, 0, 2000
Wu, Q-X; Mueller, GM; Lutzoni, FM; Huang, Y-Q; Guo, S-Y, Molecular Phylogenetics and Evolution. 17 vol. (1); pp. 37-47

Genetic variation within and among populations of the threatened lichen Lobaria pulmonaria in Switzerland and implications for its conservation, 0, 1999
Zoller, S; Lutzoni, F; Scheidegger, C, Molecular Ecology. 8 vol. (12); pp. 2049-2059

Teleomorph-anamorph connections: The new pyrenomycetous genus Carpoligna and its Pleurothecium anamorph, 1999
Fernández, FA; Lutzoni, FM; Huhndorf, SM, Mycologia. (1999) 91 vol. (2); pp. 251-262

Sampling confidence envelopes of phylogenetic trees for combinability testing: A reply to Rodrigo, 1999
Lutzoni, F; Barker, FK, Systematic Biology. (1999) 48 vol. (3); pp. 596-603

Genetic variability within and among populations of the threatened foliose lichen Lobaria pulmonaria (L.), 1999
Zoller, S; Lutzoni, F; Scheidegger, C, Molecular Ecology. (1999) 8 pp. 2049-2060

Phylogeny of lichen- and non-lichen-forming omphalinoid mushrooms and the utility of testing for combinability among multiple data sets., 1997
Lutzoni, FM, Systematic Biology (OUP). (1997) 46 vol. (3); pp. 373-406

Accelerated evolution as a consequence of transitions to mutualism., 1997
Lutzoni, F; Pagel, M, Proceedings of the National Academy of Sciences of USA. (1997) 94 vol. (21); pp. 11422-11427

ntegration of morphological and molecular datasets in estimating fungal phylogenies, 1995a
Lutzoni, F; Vilgalys, R, Canadian Journal of Botany. (1995a) 73(Suppl. 1) pp. S649-S659

A generic redelimitation of the Ionaspis-Hymenelia complex (lichenized ascomycotina), 1995
Lutzoni, FM; Brodo, IM, Systematic Botany. (1995) 20 vol. (3); pp. 224-258

Omphalina (Basidiomycota, Agaricales) as a model system for the study of coevolution in lichenized fungi, 1995b
Lutzoni, F; Vilgalys, R, Special Issue of Cryptogamic Botany. (1995b) 5 pp. 82-97

Proposal to conserve the name Gyalecta suaveolens Fr. (lichenized Ascomycota) with a conserved type, 1994
Lutzoni, FM; Brodo, IM, Taxon. (1994) 43 vol. (4); pp. 657-659

Ionaspis alba (Ascomycotina, Hymeneliaceae), a new lichen species from eastern North America, 1994
Lutzoni, FM, Bryologist. (1994) 97 vol. (4); pp. 393-395

References on the vegetation of Québec, 1991
Grandtner, MM; Lutzoni, F, Excerpta Botanica Sec. B. Bd. (1991) 29 vol. (1); pp. 1-24

Lichens on serpentine and amphibolite on the plateau of Mt. Albert, Gaspesie, Quebec, 0, 1988
Sirois, L; Lutzoni, F; Grandtner, MM, Canadian Journal of Botany. 66 vol. (5); pp. 851-862

Les lichens sur serpentine et amphibolite du plateau du mont Albert, Gaspésie, Québec, 1988
Sirois, L; Lutzoni, F; Grandtner, MM, Canadian Journal of Botany. (1988) 66 vol. (5); pp. 851-862

Book Chapters:

Pezizomycotina: Lecanoromycetes in Volume VII of The Mycota Part B, 2014
Gueidan, C; Hill, DJ; Miadlikowska, J; Lutzoni, F

The Fungi in Assembling the Tree of Life, 0, 2004
Taylor, J. W., Spatafora, J., O’Donnell, K., Lutzoni, F., James, T., Hibbett, D. S., Geiser, D., Bruns, T. D. and Blackwell, M.

Accounting for phylogenetic uncertainty in comparative studies of evolution and adaptation in Biological Evolution and Statistical Physics, 0, 2002
Pagel, M. and Lutzoni, F.

Lichens in Encyclopedia of Evolution, 0, 2002
Lutzoni, F.

The corticolous and lignicolous species of Bacidia and Bacidina in North America in , 1999
Lutzoni, F. [Review] Stefan Ekman in Opera Botanica 127, 148 pp., 1996.

Evolutionary consequences of transition to a lichen symbiotic state and physiological adaptation to oxidative damage associated with poikilohydry in Plant response to environmental stresses: From phytohormones to genome reorganization., 1999
Kranner, I., and Lutzoni, F.

INTEGRATION OF MORPHOLOGICAL AND MOLECULAR-DATA SETS IN ESTIMATING FUNGAL PHYLOGENIES in , 0, 1995
LUTZONI, F; VILGALYS, R

Papers Submitted

Is vanadium a biometal for boreal cyanolichens? in New Phytologist 2014
Darnajoux, R; Constantin, J; Miadlikowska, J; Lutzoni, F; Bellenger, J-P

Genetic variation in horizontally transmitted symbionts of pine needles reveals population structure in cryptic species in American Naturalist 2014
Oono, R., Lutzoni, F., Arnold, A. E., Kaye, L., U’ren, J. M., May, G., Carbone, I.

Multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 312 genera and 66 families in Molecular Phylogenetics and Evolution 2014
Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., Gaya, E., Hafellner, J., Hofstetter, V., Gueidan, C., Kukwa, M., Lücking, M., Björk, C., Sipman, H. J. M., Burgaz, A. R., Thell, A., Passo, A., Myllys, L., Goward, T., Fernández-Brime, S., Hestmark, G., Lendemer, J., Lumbsch, H. T., Schmull, M., Schoch, C., Sérusiaux, E., Maddison, D. R., Arnold, A. E., Stenroos, S. and Lutzoni, F.

Awards

  • 2009 Edward Tuckerman Award, American Bryological and Lichenological Society

  • 2005 C. J. Alexopoulos Award, Mycological Society of America

  • 2005 Alexopoulos Prize, Mycological Society of America

  • 2000 George R. Cooley Award, American Society of Plant Taxonomist

  • 1996 Twelfth Annual Perry Prize, Department of Botany, Duke University

  • 1995 Duke University Mellon Program in Plant Systematics Dissertation Fellowship, Duke University

  • 1993 Mycological Society of America Graduate Fellowship, Mycological Society of America

  • 1992 New England Botanical Club Award for the Support of Botanical Research, New England Botanical Club

  • 1989 A. J. Sharp Award, Botanical Society of America.

  • 1989 Lionel Cinq-Mars Award, Canadian Botanical Association